| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_0245 |
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| Symbol | |
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| ID | 3520744 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 249842 |
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| End bp | 251278 |
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| Gene Length | 1437 bp |
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| Protein Length | 478 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637282711 |
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| Product | sugar transporter family protein |
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| Protein accession | YP_267012 |
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| Protein GI | 71280279 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00879] MFS transporter, sugar porter (SP) family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.669235 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCTCCT CTGAGCCTGA TAATTCAATT CAAAAACTGC ACGACACTGA AGAAGTTCAA
ACTTCATTTT TATACGTACT ATTTATCTCC TCTGTGGCTG CCATCGGTGG GTTTCTATTT
GGTTTTGATT CCGGTGTTAT TAACGGCACA GTAACTGCGT TAGGAAATGC TTTTAACGCT
AGCGACGTAG CTAGTGGCTT TAATGTCGCC TCGGTACTGT TAGGTTGTGC TGTTGGTGCC
TTGATGGCTG GACCGATATC TGATCGGTTT GGACGTAAAC CCATCATGAT TATTACTGCG
ATTATCTTTG CCATTAGCGC CTTTGGATCG GGTATATCAA GTTCGTCTGC TGAATTTATT
TTTTATCGAT TGATTGGCGG GTTAGGCATA GGTGCTGCAT CAGTATTAGC CCCTGCTTAC
ATCGCTGAAG TTGCACCCGC TGCTTTACGA GGCCGTTTAG CTACTTTGCA ACAATTAGCC
ATCGTACTTG GCTTGTTTGC TGCTTTTTTA AGTAATTTCC TTATTGCCTC TGTGTCTGGT
GGTGCTGAAG CTATGCTGAT GTTAGATATC GCTGCCTGGC GTTGGATGTT TTGGGTAGAG
TTATTGCCGG CTGTGCTATT TTTAGTTGGT GTGATATTTA TTCCAGAATC ACCACGTTAT
TTAGTCGCTC AAGGTAAGAT TGAAGAAGCC AGAACCATAT TCAAACGCAT AGCAACCGGC
GTTGAAAATG AGCAAATTGA AGAAGTTAAA AAATCGCTGC ACGGCGATAA AAAACCTAGC
ATCAGGGATC TTTTTATTGA TGGTAAGAAA AAAATTCATC CTATCATTTG GATCGGTATC
GGACTGTCGG TATTCCAGCA ATTTGTCGGT ATTAACGTGG TGTTTTATTA TGGAGCTGAG
CTTTGGCAAG CTGCGGGTTT TGACGAATCA CAATCGTTAT TTATTAACCT TATCGCAGGT
ACAACCAATA TCATTTCTAC TTTCATAGCT ATCGCCTTAG TGGACAAAAT TGGCCGTAAA
CCGTTATTAC TGGTCGGTAG TGTCGGCATG TTTATCAGCT TAGGTGCTCT GACCTTTATC
TTTGGTACCG GTGGTCTAGA TGAAGCAGGT AAGTTGGCAT TAAGTGATAC GACAGGCACA
GTGGCTTTAA TCATGGCTAA TTTATTTGTG GTGTTTTTTG GCTTAAGTTG GGGACCTATT
GTTTGGGTTT TATTAGGCGA GATGTTTAAT AATCGTATCC GTGGTGCTGC TTTAGCTATT
GCTGCAAGTG CTCAATGGCT AGCAAATTTT GCCATTACCA TGACTTTCCC GATATTGTTG
GGCAGCTTTG GTTTGGCTGG CGCCTATGGC TTATACACAG TATCAGCATT ACTAAGTATT
TTCTTTGTAA TCAAATATAT AAAAGAAACA CGCGGCATTC GTTTAGAGGA AATGTAA
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| Protein sequence | MTSSEPDNSI QKLHDTEEVQ TSFLYVLFIS SVAAIGGFLF GFDSGVINGT VTALGNAFNA
SDVASGFNVA SVLLGCAVGA LMAGPISDRF GRKPIMIITA IIFAISAFGS GISSSSAEFI
FYRLIGGLGI GAASVLAPAY IAEVAPAALR GRLATLQQLA IVLGLFAAFL SNFLIASVSG
GAEAMLMLDI AAWRWMFWVE LLPAVLFLVG VIFIPESPRY LVAQGKIEEA RTIFKRIATG
VENEQIEEVK KSLHGDKKPS IRDLFIDGKK KIHPIIWIGI GLSVFQQFVG INVVFYYGAE
LWQAAGFDES QSLFINLIAG TTNIISTFIA IALVDKIGRK PLLLVGSVGM FISLGALTFI
FGTGGLDEAG KLALSDTTGT VALIMANLFV VFFGLSWGPI VWVLLGEMFN NRIRGAALAI
AASAQWLANF AITMTFPILL GSFGLAGAYG LYTVSALLSI FFVIKYIKET RGIRLEEM
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