Gene CPS_0237 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_0237 
SymbollexA 
ID3521899 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp240332 
End bp240967 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content41% 
IMG OID637282703 
ProductLexA repressor 
Protein accessionYP_267004 
Protein GI71281427 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) 
TIGRFAM ID[TIGR00498] SOS regulatory protein LexA 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0532878 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAGATT CAACTACCGA ATTACGCCCA CTGACTAAAC GACAGCAACA GATTTATGAT 
TTAATCAAAG CAAAGATTCA AGATACAGGC ATGCCACCTA CACGTGCTGA AATCGCTAAT
TTTTTTGGTT TCAAATCAGC TAATGCCGCC GAAGAACACT TAAAAGCTTT AGCAAAAAAA
GGCTACATTG AAATGCTTGC AGGCACTTCT CGTGGCATTC GCTTGGTTGA AGAAATGCTT
GAAGCAGAAG GTTTACCACT GATAGGGCGA GTTGCCGCCG GTGAACCTAT TTTGGCGCAA
GAGCATATTG AAGAACATTA TAAAATGGAT GGTAATTTAT TCCATCCTGC TGCCGATTAT
CTCTTGCGTG TAAATGGCGA AAGCATGAAA GATATCGGTA TTCTAGACGG CGACTTACTT
GCTGTGCATC AAACTACTGA AGTACAGAAT GGTCAAGTTG TTGTTGCCCG TGTTGAAAAT
GATGTCACCG TAAAACGTTT CAAACGTGAA GGAAATGTTG TCTATTTGCA TGCAGAAAAT
GAAGACTTCT CTCCTATTAA AGTCGACTTA GCTAATCAAG AGTTTAATAT TGAGGGTATC
GCCGTCGGTA TTATTCGAAG TGGACGTTGG ATGTAA
 
Protein sequence
MIDSTTELRP LTKRQQQIYD LIKAKIQDTG MPPTRAEIAN FFGFKSANAA EEHLKALAKK 
GYIEMLAGTS RGIRLVEEML EAEGLPLIGR VAAGEPILAQ EHIEEHYKMD GNLFHPAADY
LLRVNGESMK DIGILDGDLL AVHQTTEVQN GQVVVARVEN DVTVKRFKRE GNVVYLHAEN
EDFSPIKVDL ANQEFNIEGI AVGIIRSGRW M