Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_0236 |
Symbol | |
ID | 3521550 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 238207 |
End bp | 239766 |
Gene Length | 1560 bp |
Protein Length | 519 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637282702 |
Product | cytochrome c oxidase, subunit II |
Protein accession | YP_267003 |
Protein GI | 71281081 |
COG category | [C] Energy production and conversion |
COG ID | [COG1622] Heme/copper-type cytochrome/quinol oxidases, subunit 2 [COG2010] Cytochrome c, mono- and diheme variants |
TIGRFAM ID | [TIGR02866] cytochrome c oxidase, subunit II |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.717105 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGGGAAAC ATAAGCTAAT TTGGCTAGTG TTGGTCAGCC TATTTGCCAA TTCAGCCTGG GCAGAGACGC AGTTAAACCT AACTAAAGGG GTTACTGCCG TTAGTAGAGA CGTATATGAT TTACATATGC TAGTGCTCTA TATTTGTACT GCTATCGGTA TTTTAGTTTT TGGCGCTATG TTTTGGTCGA TTGCTTTTCA CAGAAAATCT AAAGGTGCAA AGCCTGCTGA TTTTCATGAA AGTACTAAAG TAGAAATTTT ATGGACAGCA ATACCCATTG TTATTTTAAT CGCCATGGCA GTGCCTGCTA CACAAACACT GATAGCGATG GAAGACAATG AGAACTCTGA TGTTACGATT CAAATCACGG GCTCGCAATG GAAATGGCAT TACAAATACT TTGACCAAGA TATTGAATAT TATTCTGTGC TTTCCACCCC TCGCGAGCAA TACCAAAACC AACAAGAAAC TAGCGCCATC AAAGGTAAAA ACTATTTACT TGAGGTTGAT AAGCCGCTTG TTATTCCTGC TAATAAAAAA GTTAGATTTT TAATAACATC TGATGATGTT ATCCATTCAT GGTGGGTGCC TGCTTTTGCC GTTAAACAGG ATGCTAATCC AGGATTCATC AATGAAGCCT GGACTAGAGT CGAAGAACCC GGTGTCTATC GCGGTCAATG TGCCGAGTTA TGCGGAAAAG ATCATGGCTT TATGCCCATA GTTGTTGAGG TAAAATCAGC TGAAGATTAT GACATTTGGC TCAATGAACA ACAACAACGT ATCGCCGCTG CAGCAAGTGC CGAACAAGAC TCATTAAACG CTTCTGTATC AAAAGAAGAA CTTATGCAAT TAGGTGAAAC AACTTACACA GCCTACTGCT CAGCTTGTCA TCAACCAACC GGTTTAGGTT TGCCGCCGGC CTTCCCTGCA TTAAAAGGTA GCCCTATAGC TACAACGGGT ACGATAGAAG AGCACCTCAA TATTGTCTTT AACGGTAAAG CGGGCACAGG TATGCAAGCC TATGGCAAAC AATTGAGTTT AAAAGAGATA GCCGCAGTCG TCACTTATGA GCGAAATGCT TGGGGCAATG ATACTGGTGA TATCGTGCAA GCCTCTGATG TAAAGTCTGC TGTTGATAAC ACATCACAAG ATGCTAAAGG AGTCGTCACA ATTGAAACTA ACGTTGAAGA TGCGGTAGAG ACAATGACTG AAGAAGCACC CGTTGAGGAT TTAGCTAAAG TGTATAGCCA AGATGAATTA ATGGCTATGG GCGAAAAAGT TTATATGACA GCTTGTGTTG CTTGTCATCA ACCAACAGGT GCAGGATTAC CTCCAGCATT TCCTGCGCTT AAAGGCAGTT TGATTGCAAT GGGGGATATC GCTATTCATT TAGATATGGT GCTTAACGGT AGTAAGAAAA ATCCTGCCAT GGCTGCTTTT GGTAGTCAAT TAACCAAAAC CGAAATAGCC GCTGTTGTGA CTTATGAGCG TAATGCTTGG GGAAATAATA CCGGTGATTT AGTACAACCT GCAGCTGTTG ATGCTGCTAG TGCGAAGTAG
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Protein sequence | MGKHKLIWLV LVSLFANSAW AETQLNLTKG VTAVSRDVYD LHMLVLYICT AIGILVFGAM FWSIAFHRKS KGAKPADFHE STKVEILWTA IPIVILIAMA VPATQTLIAM EDNENSDVTI QITGSQWKWH YKYFDQDIEY YSVLSTPREQ YQNQQETSAI KGKNYLLEVD KPLVIPANKK VRFLITSDDV IHSWWVPAFA VKQDANPGFI NEAWTRVEEP GVYRGQCAEL CGKDHGFMPI VVEVKSAEDY DIWLNEQQQR IAAAASAEQD SLNASVSKEE LMQLGETTYT AYCSACHQPT GLGLPPAFPA LKGSPIATTG TIEEHLNIVF NGKAGTGMQA YGKQLSLKEI AAVVTYERNA WGNDTGDIVQ ASDVKSAVDN TSQDAKGVVT IETNVEDAVE TMTEEAPVED LAKVYSQDEL MAMGEKVYMT ACVACHQPTG AGLPPAFPAL KGSLIAMGDI AIHLDMVLNG SKKNPAMAAF GSQLTKTEIA AVVTYERNAW GNNTGDLVQP AAVDAASAK
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