| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_0219 |
|---|
| Symbol | |
|---|
| ID | 3518735 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Colwellia psychrerythraea 34H |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003910 |
|---|
| Strand | - |
|---|
| Start bp | 224791 |
|---|
| End bp | 227367 |
|---|
| Gene Length | 2577 bp |
|---|
| Protein Length | 858 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 637282685 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_266986 |
|---|
| Protein GI | 71278674 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTACTTT TACGAATTCT GATTTTATCC ATTACGCTGC TCTGTTCTAA CTGTATTATT
GCCATGCCCG CGCAAGATTA CTTACCAGCA GGTAGCAAAT TTAATAGCAA AATATCCTTA
CCAAGTAGCA GCTTAGGATT TGAAATTGGC CAACGCCATG TTAGACATGA TCAACTAAAA
AGCTATTTTT ATCAGTTGGC GAAGGACTCT GAGCGGGTAA ATATTACCTC TATGGGAACA
ACATCTCAGC AACGAGAACA GTTACTCGTT ACCATTTCTA GCTCTGAAAA CTTAGCAAAT
CTATCGAGTA TTCTCAGTGA ACGTAACCTG TTTTCTCAAA AGAAAGGTCA GCTAGATAAT
CAAAAATCCG ACAAAGCCCC CTTAGTTATT TGGTTAGGTT ATAGCGTGCA CGGTGATGAA
ATAAGTGGTG CAAATGCAGC CATGATTGTT GCTTATTATT TAGCTGCTAA CACAGATAAA
AGTCTTACTG AAATGCTTGC CAATACCGTG ATAGTTTTAG AGCCTAGTAT TAACCCTGAT
GGCATGGATA GATTTGTTAA TTGGGTTAGT ACTTATCGCA ATTCTACTGA CAATAGCGAT
GCCAACCATA TAGAACACCA TCAAGGCTGG GTTACAGGGC GAACCAATCA TTTCTGGTTT
GACTTGAACC GCGACTGGTT ATTACTCTCT CAACAAGAAA GCCAACATCG ATTAGAATAT
TTCCACCAAT ACCAACCCCA CGTTGTTGGT GATTTTCATG AAATGGGTCA TAACAGCAGT
TATTTTTTTC AGCCTGGCAT CCAAAGTCGG ACTCACCCAC TGACTCCGAA AAGAAATGTC
GACTTAACAA CAACATTGTC AAAATTTCAT GCTTCAGCAT TAGATAAACA AAAACGTCTT
TATTATAGCG AAGAGAATTT CGATGATTTT TACTACGGTA AGGGCTCAAC CTATCCTGAT
ATTAATGGCA GCATAGGTAT ATTGTTCGAG CAAGCTAGTG CTAGAGGAAT GCAGCAAGAA
ACAATCAATG GCTTACTGAC GTTAGAGTTT AGTATAGAAA ACCATGTGAC CACCTCCCTC
TCTACCATCA ATGGTGCTTG GGAAAATAGA AAGCAATTAA AGCAATACCG CAGTGAGTTT
TATCAACAAA GTAATAAACT AGCAAAAAAA GAAGATTTTA CCGGCTATTT ACTGCACGAA
GGTAGCGATA AATTTCGCCT CAATACTTTG TTGTCAAAAC TCGCGCAGCA TAAAATTAAG
GTTTATCCGC TGATCGCTGA CTTTGAATTT GAAGATACTG AATACCAGAA AGATAACAGT
TATTACGTAC CTCTTGCACA ACCTCAGTTT CGACTAATTC AAGCTTTGTT TAATCAACAA
ACTAACTTTA AAGATAATAC TTTTTATGAT GTTTCGGGTT GGACAATGCC GTTAGCTATG
AATATTGAAT CTATCCCAGT AAACCGTACT CGTAGACTAA AGTTGGCGAA ACAAGCGTGG
GCCATGCCTT CAACGACCAA ACCAAACAAT AAAAGCATAT CAGCGTACGG CTACATTTTT
GAATGGCATC ACTTTTTAGC GCCTAAGTTA CTCAATAAGC TTCTAAATAA TAATATCAAA
GCAAAAGTAG CAACTAAGCC TTTCACAAGT TTAATCAATG GTGAAACCAA GCAGTTTGAA
GCGGGTAGCA TAGTGATTCC CGCAGGTATT CAACAGATCG AAAATTGGCA AGAGACATTA
ATTTCCGCCA GTAATAGTGC TGGTATTAAG TTGAGCAGTA TTAGTACCGG TTTGACCATG
AAAGGGGTTG ATATTGGGAG CAGTTCATTA AAGCCAATTA GTAAGGCTAA AACACTTTTA
TTAGGGGGTG CTGGCATATC TCAATACGAA GCAGGTGAAG TCCGCTTCTA TCTCGATGAA
ACACTTAATA TCCCACTATC TATTATCGAC CATAATCAGT TAAGACAAGT CGACTTATCG
AGCTATAGCC ATATCATTCT CGTTGATGGT GATTACCAGC ACGTTACTGA TGATACTGCG
AAAAAAATCA AAGCATGGGT TAAACAAGGC GGGGTGATAA TCAGTCAAAA GCGTGCGTCT
CTTTGGTTAG CCAAACAAGA AATATTACGT GCTAGGTTTG TTACTAAAGA ACAGATAAAT
CAATTGTTTG ATGATGAAAA ACTCAACTAT CAAGATAAAG AAAGCCTCGC TAGTCGTAAA
CGTATTGCGG GCGCTATTTT CCAAGTACAG TTAGATACTA GCCATCCGCT AGCTTATGGC
TATCAACAAA GCTTATTGCC TTTATTCCGT AATAGTAATT TGATAATGGA ACATCCCCAA
CAGCCATTTA TAACCTTAGC AAAATATACG CCAGCACCTT TACTCAGTGG TTATACTGAC
AAAAACTTGG TTAATCGATT AGCACATAAT GCCGCGATTG TTGCTCACAA TGTCGGCAAA
GGCCGAGTAA TAGCAACAAC AGAGGTACTA GCATTTAGAG GTTATTGGCA TGGGAGTGCA
AAATTACTCG CTAACAGTTT ATTTTTTAGT AAAGCTTTTT CTGCGCCATA TAAATAA
|
|---|
| Protein sequence | MLLLRILILS ITLLCSNCII AMPAQDYLPA GSKFNSKISL PSSSLGFEIG QRHVRHDQLK
SYFYQLAKDS ERVNITSMGT TSQQREQLLV TISSSENLAN LSSILSERNL FSQKKGQLDN
QKSDKAPLVI WLGYSVHGDE ISGANAAMIV AYYLAANTDK SLTEMLANTV IVLEPSINPD
GMDRFVNWVS TYRNSTDNSD ANHIEHHQGW VTGRTNHFWF DLNRDWLLLS QQESQHRLEY
FHQYQPHVVG DFHEMGHNSS YFFQPGIQSR THPLTPKRNV DLTTTLSKFH ASALDKQKRL
YYSEENFDDF YYGKGSTYPD INGSIGILFE QASARGMQQE TINGLLTLEF SIENHVTTSL
STINGAWENR KQLKQYRSEF YQQSNKLAKK EDFTGYLLHE GSDKFRLNTL LSKLAQHKIK
VYPLIADFEF EDTEYQKDNS YYVPLAQPQF RLIQALFNQQ TNFKDNTFYD VSGWTMPLAM
NIESIPVNRT RRLKLAKQAW AMPSTTKPNN KSISAYGYIF EWHHFLAPKL LNKLLNNNIK
AKVATKPFTS LINGETKQFE AGSIVIPAGI QQIENWQETL ISASNSAGIK LSSISTGLTM
KGVDIGSSSL KPISKAKTLL LGGAGISQYE AGEVRFYLDE TLNIPLSIID HNQLRQVDLS
SYSHIILVDG DYQHVTDDTA KKIKAWVKQG GVIISQKRAS LWLAKQEILR ARFVTKEQIN
QLFDDEKLNY QDKESLASRK RIAGAIFQVQ LDTSHPLAYG YQQSLLPLFR NSNLIMEHPQ
QPFITLAKYT PAPLLSGYTD KNLVNRLAHN AAIVAHNVGK GRVIATTEVL AFRGYWHGSA
KLLANSLFFS KAFSAPYK
|
|---|
| |