Gene CPS_0214 details

Gene Information

• Locus tag: CPS_0214
• ID: 3522235
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Colwellia psychrerythraea 34H
• Kingdom: Bacteria
• Replicon accession: NC_003910
• Strand: +
• Start bp: 220974
• End bp: 221630
• Gene Length: 657 bp
• Protein Length: 218 aa
• Translation table: 11
• GC content: 35%
• IMG OID: 637282680
• Product: TetR family transcriptional regulator
• Protein accession: YP_266981
• Protein GI: 71281763
• COG category: [K] Transcription
• COG ID: [COG1309] Transcriptional regulator

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.705047
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAACCC GAGATAAAAT AATCCAAGCC AGTATTGAAT TATTTAATGA GCAAGGAGAG 
CGTAATGTTA CCACTAACCA TATCGCTGCT CACTTAGCCA TTAGCCCTGG TAATCTGTAT 
TATCATTTCC GTAATAAAGA AGACATTATT TTATCTATTT ACGAAGAGTA CGCACGTAGC 
TTGCTATTAG AGACTTTGCC AAAGGTCTCT TCAGAAGTAA AACCATTAGA TTCACTTATT 
TTGTATATGG ATTCTGTTTT TCAAACGACA ATGAAATTTC GTTTCTTCTA TAGCAATCTA 
CCTGTGCTAT TGGATAAAAA TCCGATTTTG CGAGAAAAAT ATGTTGAAGT GCAACAGTCC 
ATTTCAGAAC GCGTTAGTCA ACTTCTTATT TCATTAAGAG CTGCTGATTA TATTGACTTT 
AATGATGATG AATTGGCTGA TATTGTCAGT ATTTTACGTC TGATTAATAC ATTTTGGGTT 
AGTTTTCATC AAACTCAGAC CATAGTGAAT GAAGTGAATG ATTCAGTATT CTACCAGGGG 
GTACTTAAAA TATTAGTTAT CCTACGTCCG TATACTAAAG CACATGCAAT TAGTGAACTT 
AATCACGCTC GCGATGTGTA CCAGCAAAGA TATCGTGAAG AGGCAGAAAC AGCTTAA 

 

Protein sequence

MKTRDKIIQA SIELFNEQGE RNVTTNHIAA HLAISPGNLY YHFRNKEDII LSIYEEYARS 
LLLETLPKVS SEVKPLDSLI LYMDSVFQTT MKFRFFYSNL PVLLDKNPIL REKYVEVQQS 
ISERVSQLLI SLRAADYIDF NDDELADIVS ILRLINTFWV SFHQTQTIVN EVNDSVFYQG 
VLKILVILRP YTKAHAISEL NHARDVYQQR YREEAETA