| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_0181 |
|---|
| Symbol | slmA |
|---|
| ID | 3522195 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Colwellia psychrerythraea 34H |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003910 |
|---|
| Strand | - |
|---|
| Start bp | 191621 |
|---|
| End bp | 192217 |
|---|
| Gene Length | 597 bp |
|---|
| Protein Length | 198 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 637282648 |
|---|
| Product | nucleoid occlusion protein |
|---|
| Protein accession | YP_266949 |
|---|
| Protein GI | 71281723 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTCGCCA CACAAAATAA GAACCTGAAG CCAAACCGTA AACACCAAAT ATTAGAATCC
TTAGCGTTAA TGTTACAAAA CTGTCCTGGG CAGCGTATCA CTACCGCAAA GTTAGCTGCT
GAAGTTGGTT TTTCAGAAGC GGCTCTGTAT CGTCATTTCC CATCAAAAGC ACGTATGTTT
GAAGGCTTAA TCGACTTTAT CGAAGAGTCT ATTTTTTCAC GAATCAATTT GATTCTTGCG
GACCATAAAG AAGCGTTAGT ACGTTGCCAT CACATATTGC ATGTTTTAGT CGTTTTTGCT
GAGCGCAACC CTGGAATGTG CCGAATATTA GCAGGTGATG CACTAATGGG AGAGAATGAG
CGGTTACGCG GCAGAGTTCA TCAGTTTTTT GAAAAACTAG AGTCTCAATT TAAGCAAGTA
TTAAGAGAAC GAAAACTACG TGAAGGTAAA ACATTTACCA TTAATGAAGC AGCTTTAGCT
AGCCTATTAG TCTCGTTCGC TGAAGGTAAA ATCAGTCAAT ACGTTCGATC CGGCTACAGT
AAAAAGCCAA GTACTGACTT TAATGAGCAA TGGCAATTTT TAATGGCCAA CAAGTAA
|
|---|
| Protein sequence | MVATQNKNLK PNRKHQILES LALMLQNCPG QRITTAKLAA EVGFSEAALY RHFPSKARMF
EGLIDFIEES IFSRINLILA DHKEALVRCH HILHVLVVFA ERNPGMCRIL AGDALMGENE
RLRGRVHQFF EKLESQFKQV LRERKLREGK TFTINEAALA SLLVSFAEGK ISQYVRSGYS
KKPSTDFNEQ WQFLMANK
|
|---|
| |