| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_0180 |
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| Symbol | pepD |
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| ID | 3521648 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 189694 |
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| End bp | 191157 |
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| Gene Length | 1464 bp |
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| Protein Length | 487 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637282647 |
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| Product | aminoacyl-histidine dipeptidase |
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| Protein accession | YP_266948 |
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| Protein GI | 71281177 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2195] Di- and tripeptidases |
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| TIGRFAM ID | [TIGR01893] aminoacyl-histidine dipeptidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTACTC TCTCACAGTT AAAACCTGCC AGCTTATGGC AATTATTTGA AAAAATTTGC
AGTATTCCAC ACCCGTCTAA ACATGAGCAA AAGATATCCT TGTGGATCCA AGATTGGGCG
AAAGAACTGG GCCTAGCCAT TAAAGAAGAT GCTGTTGGCA ATTTATTTAT TAAAAAACCA
GCAACCGCTG GCATGGAAGA CCGTAAGGGC ATTATTTTAC AAGCACATAT GGATATGGTG
CCACAGAAAA ACAATGACAC TGACCATGAC TTTATAACCG ACCCAATTAA ACCTTATGTC
ATTGATTCTG GGGATTGGGT AACGGCTGAA GGAACGACAT TAGGTGCAGA TAATGGTGTT
GGCTTAGCCT CCGCATTAGC AATTTTAGCC AGTGATGATA TTCCACATGG ACCGTTAGAA
GTACTAGTAA CTATTGATGA AGAAGCCGGA ATGACTGGCG CTTTTGGCCT AGAAGCTGGC
TGGCTTGATG GTGATATCTT AATCAACACC GATTCAGAAC AAGAAGGTGA GGTTTACATG
GGCTGTGCTG GTGGTATTGA TGGTAATGCT ACTTTCGCAC TAACATTAGA AGATGTTCCT
AGTAATTACC AAGCTTTTAA CTTATCTATC TCTGGCCTAA AAGGTGGGCA TTCTGGTGTC
GATATTCATA CTGGGCGTGC AAACGCTAAC AAGTTATTAG TACGATTTTT ATTAAGTGCT
AGCATTGATT TTGATATCAG CCTTACTGAG CTAAATGGTG GCAGTTTACG TAATGCTATC
CCTAGAGAAG CTAATGCTAG TTTTGTTGTT GCAAAAGATA AAGTCGAGGC GTTAAAGGTC
GCCTTAGCAG ATTACCTCTC AACTATTAGT GCTAATTTAG GTGCAATTGA AACTGATATC
GATATGTTAT TAATTTCACC TGAAGACTTT GAGCAGTGTT GGACAAAAGC CACACAAGCT
TCAATTCTAC GTGCGCTGAA TGCTTGTCCT AATGGCGTCA TTCGAATGAG TGATGATATT
GAAGGCATTG TAGAAACATC ACTAAACCTA GGCGTAATTC ATACTCGTGG CAGCAAGCTT
AATGCCATGG TATTAATACG CAGCTTGCAT GACGATGGCC GCTTGGAAAC TCAACGAATG
GTGCAATCTG TTTTTGAACT TGCCGGTGCT AATGTTGTTT TCTCAGGCGC TTATCCTGGT
TGGAAACCTA ATACAGATTC AGCCATCATG CAGACTGTTA GAGATACATA CGAAAGCATA
TTTAATAAAG TGCCTGCGGT AATGGTAATT CATGCAGGCT TAGAATGTGG CTTATTCAAA
ACAGCGTATC CACATTGGGA TATGGTTTCT ATTGGACCAA CGATTAAGTT CCCCCATTCG
CCAGACGAAA AAATTGAAAT TGCGACTGTT GAGCAATATT GGCAATTATT AGTGGCTGTA
TTAGCTAATA TCCCAAAAAA ATAA
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| Protein sequence | MSTLSQLKPA SLWQLFEKIC SIPHPSKHEQ KISLWIQDWA KELGLAIKED AVGNLFIKKP
ATAGMEDRKG IILQAHMDMV PQKNNDTDHD FITDPIKPYV IDSGDWVTAE GTTLGADNGV
GLASALAILA SDDIPHGPLE VLVTIDEEAG MTGAFGLEAG WLDGDILINT DSEQEGEVYM
GCAGGIDGNA TFALTLEDVP SNYQAFNLSI SGLKGGHSGV DIHTGRANAN KLLVRFLLSA
SIDFDISLTE LNGGSLRNAI PREANASFVV AKDKVEALKV ALADYLSTIS ANLGAIETDI
DMLLISPEDF EQCWTKATQA SILRALNACP NGVIRMSDDI EGIVETSLNL GVIHTRGSKL
NAMVLIRSLH DDGRLETQRM VQSVFELAGA NVVFSGAYPG WKPNTDSAIM QTVRDTYESI
FNKVPAVMVI HAGLECGLFK TAYPHWDMVS IGPTIKFPHS PDEKIEIATV EQYWQLLVAV
LANIPKK
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