Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_0175 |
Symbol | trx1 |
ID | 3522647 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 184024 |
End bp | 184350 |
Gene Length | 327 bp |
Protein Length | 108 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 637282642 |
Product | thioredoxin |
Protein accession | YP_266943 |
Protein GI | 71282174 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG3118] Thioredoxin domain-containing protein |
TIGRFAM ID | [TIGR01068] thioredoxin |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGATA AAATTGTTCA GCTAACTGAT GATAGTTTTG AAGCAGATGT ATTAAAAGCA TCGGGTTTAG TATTAGTTGA TTTTTGGGCT GAATGGTGTG GTCCTTGTAA AATGATTGCC CCAGTACTTG ATGATATTGC CACAGAATAC GATGGCAAAG TGACTGTTGG TAAATTAAAC ATAGATCAAA ACTCAGCGAC ACCACCTAAA TATGGTGTAC GTGGTATTCC AACATTATTA CTTTTTAAAG ATGGTGAAAT TGCTGACACT AAAGTGGGCG CACTATCGAA AACTCAATTA AAAGAGTTTT TAGATAAAAA CTTGTAA
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Protein sequence | MSDKIVQLTD DSFEADVLKA SGLVLVDFWA EWCGPCKMIA PVLDDIATEY DGKVTVGKLN IDQNSATPPK YGVRGIPTLL LFKDGEIADT KVGALSKTQL KEFLDKNL
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