Gene CPS_0171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_0171 
Symbol 
ID3519657 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand+ 
Start bp180462 
End bp181031 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content36% 
IMG OID637282638 
ProductTetR family transcriptional regulator 
Protein accessionYP_266939 
Protein GI71278134 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGTGGC ATGAAACTCA TAAAGAGCAA TCAAAAGATA GAATCTTAAA AAGTGCTGCA 
ATGCTTTTTA CACATTATGG TTTTGAAAAA ATATCGATCA ATCAAGTGAT GAAAAATGCT 
GAACTCACCA GAGGCGCATT TTATAGTCAC TTTAATTCGA AAAGTGACTT GTACGCACAA 
GCGATAAGTA AAGGCGCAAA AGTTGCTTCG AAACGTAAAC CTGAAAATTG TCCGCAGAAT 
ATGAAAGATT TTGCTAAATA CTATTTAAGT ACTGAACATA GAGATAATAA CTATGAACAA 
GCATGTCCAT TAGCTTTTTT GGTTTCAGAT ATTAACCAAC AAAATGAACA AGTTAAAGAA 
ACTTATACCA AGACGCTGAA AGCTTTTATA GCGCAAGCTC AATCTTTAAC CGTCAGTCGT 
GAAAAAGCAC TGCAAAGCGC AGTATTGATG ATTGGCGGCT TGGCTCTATC TAGAGCTTTA 
GATGATAAAA ACTTTAGCAA TGAACTCTTA GCTGCTTGTA AAGCTGGGGT TACTTCATTA 
TCAACAGAAG AGGGCGTTAA TGTCAGCTGA
 
Protein sequence
MAWHETHKEQ SKDRILKSAA MLFTHYGFEK ISINQVMKNA ELTRGAFYSH FNSKSDLYAQ 
AISKGAKVAS KRKPENCPQN MKDFAKYYLS TEHRDNNYEQ ACPLAFLVSD INQQNEQVKE 
TYTKTLKAFI AQAQSLTVSR EKALQSAVLM IGGLALSRAL DDKNFSNELL AACKAGVTSL 
STEEGVNVS