Gene CPS_0169 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_0169 
SymbolhemB 
ID3521169 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp178463 
End bp179509 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content42% 
IMG OID637282636 
Productdelta-aminolevulinic acid dehydratase 
Protein accessionYP_266937 
Protein GI71280700 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0113] Delta-aminolevulinic acid dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCCACA ATGGTAATTC AGCATTTGGT CAATATCCTG CTCGTCGCAT GCGCCGGATG 
CGCGTTGACG ATCATACTCG TCGTTTAATG GCTGAATCTC AGTTAACGGT CAATGATTTA
ATATACCCAG TTTTTGTGCT TGAAGGCGAT AATCAGCGAG AAGCGATAGC TTCAATGCCT
GGTGTCGAAC GTAAAAGTAT TGATCTGCTT TTGGAAGAAG CACAGGAATT GGTTGATTTA
GGTATTCCGG CTATTGCACT TTTCCCTGTG ACACCAAGTG ATAAAAAGTC GCTTATGGCG
GAAGAAGCTT ATAACCCTGA TGGATTAGCG CAACGTGCAG TACGTGCACT TAAAGCTAAA
TTCCCACAGC TTGCTGTGAT CACTGATGTT GCTCTTGACC CGTTTACCAC ACATGGTCAA
GACGGTATTT TAAGTGAGAG TGATGATAAC AAAGCAGGGA AAACAGGCTA TGTTGTTAAC
GAAGTCACTA AAGATATTTT GGTAAAGCAG GCTTTATCAC ATGCTGAAGC AGGAGCCGAT
ATTGTGGCAC CTTCAGATAT GATGGATGGA CGTGTCGGTG CTATCAGAGA AGGATTAGAA
GAAAATGGCT TTGTTAATAC TAAAATATTA GCCTACTCTG CGAAGTACGC TTCTAATTAC
TATGGGCCAT TTCGTGATGC TGTCGGGTCT TCTGGTAATA TTAAAGGTGG TAATAAGCAT
ACTTATCAAA TGGATCCTGC AAATAGTAAT GAAGCTATGC ATGAAGTTGC CCAAGATATC
GCTGAAGGTG CCGACATGGT CATGGTTAAG CCAGGCATGC CTTATTTAGA TATAGTGCGT
CGTGTTAAGG ATACTTTTCA AGTACCGACC TACGCTTATC AAGTCAGCGG TGAATATGCC
ATGCATATGG CGGCAATACA AAATGGTTGG TTAGCTGAGA AACCATGTGT AATGGAAGGA
TTATTAGCAT TTAAACGTGC TGGAGCCGAT GGAATTTTGA CTTATTTTGC TAAGCAAGTT
GCGCGTTGGT TGAAAGAAGA CGCTTAA
 
Protein sequence
MSHNGNSAFG QYPARRMRRM RVDDHTRRLM AESQLTVNDL IYPVFVLEGD NQREAIASMP 
GVERKSIDLL LEEAQELVDL GIPAIALFPV TPSDKKSLMA EEAYNPDGLA QRAVRALKAK
FPQLAVITDV ALDPFTTHGQ DGILSESDDN KAGKTGYVVN EVTKDILVKQ ALSHAEAGAD
IVAPSDMMDG RVGAIREGLE ENGFVNTKIL AYSAKYASNY YGPFRDAVGS SGNIKGGNKH
TYQMDPANSN EAMHEVAQDI AEGADMVMVK PGMPYLDIVR RVKDTFQVPT YAYQVSGEYA
MHMAAIQNGW LAEKPCVMEG LLAFKRAGAD GILTYFAKQV ARWLKEDA