| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_0168 |
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| Symbol | |
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| ID | 3519387 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 177644 |
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| End bp | 178450 |
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| Gene Length | 807 bp |
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| Protein Length | 268 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637282635 |
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| Product | GGDEF domain-containing protein |
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| Protein accession | YP_266936 |
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| Protein GI | 71279107 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGAAC AAAATGCCGA GCACCTATGT TTTGGCATGG GAATTTTCTT AGGGAGTTTA
ATTACCCTCT TGTTAGGTTT ATATTTGAAT CGACATTACC GAAGAAAATA CCTCAAAATG
TTACAACAGC TTAAGCTTGC AAAAAGCAAT GTTACCATCG CTGAGCAAAC AATGAAAACC
TTGGCTAATG AGCAACAAGA CAGTCAAGAC CTGCTAGAAG AAAGAGTGCA GGAGCGTACA
TTAGAACTGA ATATAGCTTT GCAAGAGTTG GAAAGTGCTA ATCAAGAACT TGAACGTAAA
AATGTTTTAG ATGAACTAAC GGGCTTACAT AATCGTCGAT TTTATGATCA AAAAATAGTA
GCTGAATACC GTCGTAGCCG TCGTAATCTT ACCGCGTTAA GTTTAGTGCT AATTGATGTC
GACCTTTTCA AAGCAGTTAA CGATACTCAT GGGCACCTAG CGGGTGATCA GTGCCTAATT
TGGTTGGCCA GCCATATAAA ACAAAGTTTG AAGCGAAGTA CTGATAGAGC ATTTCGTTAC
GGTGGAGAAG AGTTCTGCTT AATCTTACCT AATACTGATG CTGAAGGGGC GTTACTCTTT
GCTGAACAAT TACGCGTACA GGTAGATGCT CAAGCTTTTC AATTTAGAGA TGTCGAAATT
CCACTGACAA TCAGTTGTGG TATCTCAACA TATCAACAAC AAGTTGATAT TGGTCCCGAG
CAAATATTTT CAGGTGCCGA CAACGCTTTA TATCAAGCTA AGCACAATGG CCGAAATCAA
ACCAAACAAC ACATTTTCAC AGAATAA
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| Protein sequence | MTEQNAEHLC FGMGIFLGSL ITLLLGLYLN RHYRRKYLKM LQQLKLAKSN VTIAEQTMKT
LANEQQDSQD LLEERVQERT LELNIALQEL ESANQELERK NVLDELTGLH NRRFYDQKIV
AEYRRSRRNL TALSLVLIDV DLFKAVNDTH GHLAGDQCLI WLASHIKQSL KRSTDRAFRY
GGEEFCLILP NTDAEGALLF AEQLRVQVDA QAFQFRDVEI PLTISCGIST YQQQVDIGPE
QIFSGADNAL YQAKHNGRNQ TKQHIFTE
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