| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_0167 |
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| Symbol | tatD |
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| ID | 3521192 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 176756 |
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| End bp | 177568 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637282634 |
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| Product | deoxyribonuclease TatD |
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| Protein accession | YP_266935 |
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| Protein GI | 71280723 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0084] Mg-dependent DNase |
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| TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGATAGATA TAGGCGTTAA CTTAACCAAT AAACGCTTTG AGAAAGATCG CGAAGATGTT
ATTCGACGAG CTCAAAAGGC TCAATTAGAT GGTTTGTTGA TTACCGGTAC TAGTGTTGCA
GAAAGCCAGA AAGCGTTAGC TTTGTGTCAG CATTATCAAA CAAGTTTCCC TGACTTTTTA
TTTAGCACTG CAGGTGTGCA TCCCCATGAT GCTGATCATG TGACTGCTGA CTATTTAGAG
CAACTCAAGC TATTAGCGAA ACAACAGCAA GTTAAGGCCA TTGGTGAGTG TGGTTTAGAT
TTTAATCGAA ATTTTTCAGC ACCTGCACAA CAGCAAAAAG TGTTTAGTGA ACAAGTAGCT
TTAGCTTCAG AACTGCAAAT GCCACTATTT TTACACCAAA GAGATGCTTT TGAACCATGG
TTTTCTACGT TATCACCCTA TTTTTCTGAA GTTCCGGCTA TGGTTGCGCA TTGTTTTACT
GGCACAAAAT CTGAGCTCAC TCAGTGTATA GCCGCAGATA TGTATATAGG TATCACAGGT
TGGTTATGTG ATGAGCGTAG AGGTCAAAGT TTACGAGATA TTGTAAGTCT AATTCCTTTA
AATCGATTAC TCATTGAGAC TGATGCTCCG TATCTAACAC CTCGAACAAT TCGACCAAAA
CCTAAAAGTA GCCGTAATGA GCCGTGTTAC TTACCATTTA TAGTCAAAGA AATTGCCAGT
ATTACAGGTC TTGACCAAGA AGAGATAGCT TGGCAAACTA GCCGTAATGC CGCAAAGGTA
TTTGATTTTC CATCAAAGAA AGAAATGATA TAA
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| Protein sequence | MIDIGVNLTN KRFEKDREDV IRRAQKAQLD GLLITGTSVA ESQKALALCQ HYQTSFPDFL
FSTAGVHPHD ADHVTADYLE QLKLLAKQQQ VKAIGECGLD FNRNFSAPAQ QQKVFSEQVA
LASELQMPLF LHQRDAFEPW FSTLSPYFSE VPAMVAHCFT GTKSELTQCI AADMYIGITG
WLCDERRGQS LRDIVSLIPL NRLLIETDAP YLTPRTIRPK PKSSRNEPCY LPFIVKEIAS
ITGLDQEEIA WQTSRNAAKV FDFPSKKEMI
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