| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_0163 |
|---|
| Symbol | tatA1 |
|---|
| ID | 3518665 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Colwellia psychrerythraea 34H |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003910 |
|---|
| Strand | + |
|---|
| Start bp | 174742 |
|---|
| End bp | 174999 |
|---|
| Gene Length | 258 bp |
|---|
| Protein Length | 85 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 637282630 |
|---|
| Product | Sec-independent protein translocase protein TatA |
|---|
| Protein accession | YP_266931 |
|---|
| Protein GI | 71277787 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1826] Sec-independent protein secretion pathway components |
|---|
| TIGRFAM ID | [TIGR01411] twin arginine-targeting protein translocase, TatA/E family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGTGGAA TCGGAATTTG GCAACTAGTT ATTGTTGCTG TGATTGTAGT GTTATTATTT
GGAACTAAAA AACTACGTAA TATAGGTGGT GATTTAGGTT CAGCGATTAA AGGTTTTAAA
AGTGCTATCG GTGAAGATAA AGAACAAAAA AATAGTGCAG AAAAAACATC AGATACTTTA
GCTGATAGCT CAAAGAGCAC TACAGAAGAA GTGGTCAAAA CAACAGAAAG TAAGACTAAA
GAATCAGATC AGGCTTAA
|
|---|
| Protein sequence | MGGIGIWQLV IVAVIVVLLF GTKKLRNIGG DLGSAIKGFK SAIGEDKEQK NSAEKTSDTL
ADSSKSTTEE VVKTTESKTK ESDQA
|
|---|
| |