| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_0162 |
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| Symbol | |
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| ID | 3521293 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 172025 |
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| End bp | 174478 |
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| Gene Length | 2454 bp |
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| Protein Length | 817 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637282629 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_266930 |
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| Protein GI | 71280824 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.539362 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCTAA GAACAGCCAG AAAGAATATA GTAAATCGAG CAGTGATGAT TGCCCTTGCC
GCAACATCAG TGACCTCAGT ACAAGCAGTT GCCGAAGAAG GCGCTGAAGA AGTAGAGCGT
ATTGCCGTAA CAGGCTCTCG CATTAACAGA ACCGATATTG AAAGCGCCAG CCCAGTAACG
GTAATATCTT CAGACTTTAT CACCAAGAGT GGTTTCACCT CAGTACAAGA AATATTATCA
ATGCAACCCG CTGCTGCAGG TATGAGCTTA GGTTCAACGT CTAATAACGG TTCAGGTGGT
TCGGCAACTG TTAACTTACG TGGTATGGGA GTGCAACGTA CGTTAGTGCT ATTAAATGGT
CGACGTATGG TTGCATCAGG TACTGGTGCT GACTCTTCAG TAGATTTAAA TACTATCCCT
GTTTCAATGA TTCAGACCAT TGAAATCTTG AAAGACGGTG CTTCAGCAGT TTATGGCTCA
GATGCCATTG CTGGTGTTGT TAACATCATC ACTAAGAAAG ACTTTCAAGG CACTGAAATA
ACTGCTGATG GCAGTATTAC CGACAAAGGT GATGGCGAAA GTGGGGGTTT TAGTCTTTTA
CATGGTCGTG ACTTTGCTGG TGGTAACTTA GTTGTTGGCG CCCAATATTC AAACCGTGGT
GAAATTATCC AATCGGACCG TGATTTTGTC CCTGCAGGTG AATCTTCATT TGTACCAGGA
GGTTCTTTAG GCGGAATGGT ACCAGATGGT GAAGGTGGCT TTGTTCCACG TGAAGAGTCT
TACGATTATA CCGACGATAG TTATGCACAA ACACCCAATG AATTATTAAG CTTATTCACT
AACTTTAACT CTGAAATAGC GGATGATACC GAATTAAGCG TTGAATTTAT GTATACCCGC
CGTGAGTCAA ATCAACAAAT GGCACCGCAA CCAGCTTCAA TCGACTTAGA TACAAGTTTG
TTAGATGATA ACTATACCGA TCAATTCAAA GATGAAAATG GCGTTCTGCC AGAAGAACTA
GAATATAGAC GTCGCATGAC AGATGCCGGT CCACGTATTT ACGGTCAAGA AACAGATACC
TATCGTGCTT CTGTTGGTTT GACTGGTTAC TTAAGTAATG ATTCACAGTG GGATATGTCG
GCAACTTATG GTCGTAATGA CTCAAAAGAT AGTGTTGGTA ACTCGATTCA CGCAGGGAAC
ATGGAAAAAA GTATCTACAA TCATCAAGAC GATTGGTTCA GCGGTGATCC CATGAGTAAC
GACTTCTTAG CCAGTGAAGG CGTTATGTAC ACCGAGCAAA ATGAAGGTGG CAATGAACAA
TTCATTTTAG CCGCAGGTTA TAGTGGCGTT AATGAGCACG ATATAGGTTA TGCCGTTGGA
GTTGAAAGTC GTTTTGAAAG TGGATATTAC ACACCTGATT TAATTACTCA GGCTGGTGAA
AGTACCGCGG CACAGCAAGA TCCCACAGAA GGTAATTATT CTGTACAGTC TATCTATGGT
GAAATATCTG TACCAGTAAC CGACTCTTTC ACGGTAGAAG CCGCGACTCG TTATGATAAC
TATTCAACCT TTGGTGGTGC AGCTACTTGG AAGTTAGGTG CAACTTACAG TATTACTGAT
GGTTTAATGT TTAGAGCGGT GGCTGCAACG GGCTTTAGAG CACCAAGTGT GAGTGAGCTA
TACGGTGGTA ACTCAGGTTC TTTTGATTAT TTAACTGACC CTTGGGACAA CGAACAAGAT
TCACAAATCT TAGTAAATTA CACCAGTGAT GCGGATTTAA AGCCGGAAGA AAGTGAATCA
TTTACTGCGG GTGTTGTGTG GGAAATTACT GAAGGCCTAT CTACTACTAT GGATTATTGG
CAGTTTGATA TTACTAACGC TATTAGCCGT GTGAACGTGC AAAATGAAAT GAATAAGTGT
TTCGGAGATG ATCTCGTTGC TTGTGATACT ATCGGAATTA CACCGGGTGG AGACTTATCG
GAAATGACCT CTACATTAAC CAATATTGGT CAGCAGAATA CTTCAGGTAT TGATTGGAAT
GTTAGCTACA CTGCTGGCAT GTTCAAAGTC ATGTTTGATA CGACTTATTT ACTTGAATTT
GAAGAAGACG GTATTAGCTA TGAAGGTACT ATTGGCGGCA ATATGGGGGG GTACTCACAG
CTAAAATCTA ATTTAACCGT TAGCGCCGAT TTAACAGAAG ACGTAAATTT ACTTTATACA
GCTAACTATA TTCAAGGTAT GGACGGCGAT GGCTACACTA CTGATGATGT GATTTATCAT
AACGTTTCAG CGGCTTATCA TATTAATGAT GCGTGGCAAG TAACAGGTGG TATTAAAAAT
TTATTTGATA CTGAACCTGA AGAAGTACCA GATGGTAATG ATATGAATAC AGTGCCAAAT
ATCTACGATG TTGTTGGCCG TACCTTCTTT GTTAATACGT CATATAAGTT TTAG
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| Protein sequence | MSLRTARKNI VNRAVMIALA ATSVTSVQAV AEEGAEEVER IAVTGSRINR TDIESASPVT
VISSDFITKS GFTSVQEILS MQPAAAGMSL GSTSNNGSGG SATVNLRGMG VQRTLVLLNG
RRMVASGTGA DSSVDLNTIP VSMIQTIEIL KDGASAVYGS DAIAGVVNII TKKDFQGTEI
TADGSITDKG DGESGGFSLL HGRDFAGGNL VVGAQYSNRG EIIQSDRDFV PAGESSFVPG
GSLGGMVPDG EGGFVPREES YDYTDDSYAQ TPNELLSLFT NFNSEIADDT ELSVEFMYTR
RESNQQMAPQ PASIDLDTSL LDDNYTDQFK DENGVLPEEL EYRRRMTDAG PRIYGQETDT
YRASVGLTGY LSNDSQWDMS ATYGRNDSKD SVGNSIHAGN MEKSIYNHQD DWFSGDPMSN
DFLASEGVMY TEQNEGGNEQ FILAAGYSGV NEHDIGYAVG VESRFESGYY TPDLITQAGE
STAAQQDPTE GNYSVQSIYG EISVPVTDSF TVEAATRYDN YSTFGGAATW KLGATYSITD
GLMFRAVAAT GFRAPSVSEL YGGNSGSFDY LTDPWDNEQD SQILVNYTSD ADLKPEESES
FTAGVVWEIT EGLSTTMDYW QFDITNAISR VNVQNEMNKC FGDDLVACDT IGITPGGDLS
EMTSTLTNIG QQNTSGIDWN VSYTAGMFKV MFDTTYLLEF EEDGISYEGT IGGNMGGYSQ
LKSNLTVSAD LTEDVNLLYT ANYIQGMDGD GYTTDDVIYH NVSAAYHIND AWQVTGGIKN
LFDTEPEEVP DGNDMNTVPN IYDVVGRTFF VNTSYKF
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