Gene CPS_0136 details

Gene Information

• Locus tag: CPS_0136
• ID: 3519976
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Colwellia psychrerythraea 34H
• Kingdom: Bacteria
• Replicon accession: NC_003910
• Strand: -
• Start bp: 143174
• End bp: 145333
• Gene Length: 2160 bp
• Protein Length: 719 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 637282603
• Product: hypothetical protein
• Protein accession: YP_266904
• Protein GI: 71279517

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 0.73272
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTTATCG CAAAGCGCGC GACCTTTTTT ATTTTTTCCC TATGTCTGTT TTTCGTCAGT 
GGTGCTAATG GTGCCGGTAA AGAAAAGCAA TATTTATTAC AAAAAATAGC GCAAGCCCCG 
CAATTAGAAA CAGCGGATGA CCAGTGGTTA TTACTACTGG AACAGCCAGG AAACAGTCAG 
TTCTATTACC TTGCAAATAA GCGAGGTAAA ATTTATCAGT TGGAACAAGA TAGTCCTGAT 
AACACGACTT TATTATTAGA TTTACAGCAT TTTTCGACTA AAGAGTCCGC GCTTCAACTA 
ACCGCTTTTA CCTTACATCC TAACTTCTCA TTACGTGATC AAGCAGGTTA TGGCACTTTC 
TATACTGCCC ATGTTGAAAA AGTTATTAAC AACAGAAAAA GAAAGCGTCT AAAAGATCCT 
GCTGTTACCA CGCCACTTTC TTATGATGCC ATCGTGACCG AGTGGCAATT AAATGTAACC 
AAGCAAGTCG ATGAATCAAG CCAACGTGAA GTTTTAAGAA TAGCCGTTCC CACTTTAGAA 
AGCGGCATTA GGCAATTAAA CTTTAATTCT TACAGTAAAT CATGGCATGA GGACTTTGCT 
CAGCTTTATA TTTCACTGTC ACACAACTTA GAACTACAGC AACATCCACT TTATTCAGGT 
GCCATCTTAC GCATTCATCC ACAACGAAAA GGTATCAAAA GTTATAGCGT ACCTCACGAC 
AACCCATATT ACGCGAATGA AAAATTTGAA AAGGCACTGT ATTTATTCGG TGCAGGCAAT 
ATAAATCAAT TTATTTGGCC AGATAGGTAT GCCACTAAAT TGCTGATATC ACATCAATAC 
AGCGTTAATG GCATAGTAAG ACATTGGATA TCTTATAGTG ATGGTGGGGA AGACTGGCGC 
AAAAAAGCAC CTAGAAATTT TTTATATCAA AATCAAAATA CGTTAGCTGC CAATAGTTTA 
TTAGTATACC GAGGTCAAAA TGCACCAACC TTGCGCAACA AACTATTATT GTTAACTAAA 
AATAAAAAAG AATGGCAACT CAACTCATTA TCCCATGAAA TTTCACCCGA GATAGCACTT 
GAGAACAATC AATCCAGTAA TCAGCAAAAA GCACTTTCCG CTCCCACAAT AGAGTGGCTT 
TTGAAACAAC AAGCCTTGCA AGCAAATCAC TTAACTCTCT ACCGTGATAA TCGCGGAGAA 
CTGCTGTTTT TCAATGAAGA TACTGGTGCT ATATACCAAT TATTCCAGCA AGACATAAGT 
TTAGCCATAA AAGAAAGCCA ACAAAGTGGT TCCAACGGTC TGACTTTCTT GTTTATTCTC 
ATGCTATTTT TGCTTCTCGG CTATATTTTG TATCAGATGA AGACACAACA GAAATCGGCT 
AAGGCCTTCG TTCGTAGAGA GTTTTCTAAC CTAGTTCTAA CTGAAGATAA GTTATCAATA 
AAACTATTTA AACGTCATGA GAAGAAAGCA GAAAAGGTAA TAGCATTAGC TGATATTAAT 
CAGTGCCAAG TATTACTTGG AGATTTGGTT ATTGCGACCA TTAATACCAC CATGGGACAC 
GGCTTTGACG AAGAACATGA ACAGGCATTA CGCGATATAT TCCATATTGA GCAAATTGCA 
AAAATGACCG ACGGCAAAGT TCGTCGTATT AACTTAGCGC TTCATACCGA ATCAAAAAAG 
AGACACATCA TTTGTTTATA TTTACGCAAA GGCAGCGATA GAATAACCAA AAAAGGTTAC 
TTTACCGTGG TTGATGAGGC CATTGATTGG TGCTGGCTCA TTGCCAAGAA TATCAATAGT 
GAGCAAACAG GTACACGTTC TTTCAAACCA AAATTCACTG CTGATATAGC GCGCACTGAG 
CATAAGACTC ATGATGATAC TCCGCTACAC ACTCAAGCAT CGATTATCCG TCCTGCAACT 
CGTCTTCATT CAGTTGTAGA TGATATAGAA CCTGAAAAAG TGGCGGAAGT AACTATCTCA 
GAAAAAAGTA ATGATGAAAT CACTTTAGTT GATAAACATG ATGCTACCGC AATAGAGTTA 
GCCAGAGTAG AAACCGACTT GGTTAACGCC TTAGAAAAGT TAGTAAAACT GCAACAACAG 
GGGTTTTTAA CTATTGATGA ATTTGAGCAA GCGAAAGCCA AGTTATATCA TTTTAAATAA 

 

Protein sequence

MLIAKRATFF IFSLCLFFVS GANGAGKEKQ YLLQKIAQAP QLETADDQWL LLLEQPGNSQ 
FYYLANKRGK IYQLEQDSPD NTTLLLDLQH FSTKESALQL TAFTLHPNFS LRDQAGYGTF 
YTAHVEKVIN NRKRKRLKDP AVTTPLSYDA IVTEWQLNVT KQVDESSQRE VLRIAVPTLE 
SGIRQLNFNS YSKSWHEDFA QLYISLSHNL ELQQHPLYSG AILRIHPQRK GIKSYSVPHD 
NPYYANEKFE KALYLFGAGN INQFIWPDRY ATKLLISHQY SVNGIVRHWI SYSDGGEDWR 
KKAPRNFLYQ NQNTLAANSL LVYRGQNAPT LRNKLLLLTK NKKEWQLNSL SHEISPEIAL 
ENNQSSNQQK ALSAPTIEWL LKQQALQANH LTLYRDNRGE LLFFNEDTGA IYQLFQQDIS 
LAIKESQQSG SNGLTFLFIL MLFLLLGYIL YQMKTQQKSA KAFVRREFSN LVLTEDKLSI 
KLFKRHEKKA EKVIALADIN QCQVLLGDLV IATINTTMGH GFDEEHEQAL RDIFHIEQIA 
KMTDGKVRRI NLALHTESKK RHIICLYLRK GSDRITKKGY FTVVDEAIDW CWLIAKNINS 
EQTGTRSFKP KFTADIARTE HKTHDDTPLH TQASIIRPAT RLHSVVDDIE PEKVAEVTIS 
EKSNDEITLV DKHDATAIEL ARVETDLVNA LEKLVKLQQQ GFLTIDEFEQ AKAKLYHFK