| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_0131 |
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| Symbol | |
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| ID | 3521713 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 136477 |
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| End bp | 137757 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637282598 |
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| Product | C4-dicarboxylate transporter family protein, DctM subunit |
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| Protein accession | YP_266899 |
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| Protein GI | 71281242 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4664] TRAP-type mannitol/chloroaromatic compound transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGGTA TTGTACTTTT TGCTATTGCT CTAGTGTGTT TATTTCTTGG CTATTCGGTC
GCATTCACCT TTGCAGGTGT TTCACTCATT GTTGGCGCTA TTGTTTTAGG GGCGGACTTA
TTCGCGTTTA TGCCTTATCG CATTATGAGC ATTATGGAAA ACACTATTTT AATGGCTGTG
CCCATGTTTA TTTTTATGGG GATAGTATTA CAAAAAACAG GACTAGCGGA GCGGTTACTG
GAGTCTGCGG CTAAACTCTT TGGCGGTATT GCCGGAGGCG TTGCAATTTC TACTATCATT
GTTGGTGCTT TATTAGCGGC ATCAACAGGA GTAGTTGGGG CTAGCGTTGT TGCTATGGGG
GTTATTTCCT TACCCGTAAT GTTGAAAAAC AATTATCATC AACCTACGGC AACGGGTGTT
ATTTGCGCGT CTGGTACCTT AGGACAAATT ATTCCGCCTT CGATTATCTT AATTATTTTA
GGCGATGTTA TGGGGGTGCC CGTTGGCGAT TTATTCCGAG CGGCCATTCT GCCAGGAATG
CTACTGGTTG TTACTTATGT CATTTATATT TTAATTTTAG GCAAATTTAA GCCTGAATTT
GTACCACCGT TAGTTGTCAC TGAAAACAAA CGTGAACTAC TAGTACAGGC ACTTAAAGAT
ATTGTACCGC CCTTAGTACT TATTTTAACT GTACTAGGTT CTATTTTTGC TGGTATAGCC
ACACCAACCG AATCTGCAGC CATTGGTGCA GTTGGTGCAG TTATCTTATC GATATTATAT
GGCAGCTTTT CATTCGGCAA AATGCATGAA ATATCCAAAG AAACAGTAAA AGTTACCTCA
ATGGTTTTTG CGGTATTAAT TGGCGCCACA GCATTTTCTA TGGTGTTTAG TTATTCGGGC
AGTGAGTATC TAATTGAAGA GTTTTTTATG GAGCTTCCTG GTGGCAAGTG GACATTTATT
GCCTTGGCTA TGCTCGCTAT TTTAATACTA GGCTTCTTTA TCGATTTCAT TGAAATTGCT
TTTTTAGTGG TACCCATTTT ACTGCCTGTT GCCATAGCGT TAGATATTAA TTTAGTGTGG
TTTGCTATTT TAATTTCTAT GAACTTACAA ACGTCGTTTT TAACACCACC CTTTGGTTTT
AGTTTATTTT ATCTCAAAGG CGTGGCGCCG AAATACCTTA AAACTACCAC GATATATAAA
GGCGTGATCC CCTTTATTTT AATGCAAATA GCCGTGTTGC TCTTAGTGGT GTTTTTTCCG
GAACACTTAA TTATTACTTA G
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| Protein sequence | MTGIVLFAIA LVCLFLGYSV AFTFAGVSLI VGAIVLGADL FAFMPYRIMS IMENTILMAV
PMFIFMGIVL QKTGLAERLL ESAAKLFGGI AGGVAISTII VGALLAASTG VVGASVVAMG
VISLPVMLKN NYHQPTATGV ICASGTLGQI IPPSIILIIL GDVMGVPVGD LFRAAILPGM
LLVVTYVIYI LILGKFKPEF VPPLVVTENK RELLVQALKD IVPPLVLILT VLGSIFAGIA
TPTESAAIGA VGAVILSILY GSFSFGKMHE ISKETVKVTS MVFAVLIGAT AFSMVFSYSG
SEYLIEEFFM ELPGGKWTFI ALAMLAILIL GFFIDFIEIA FLVVPILLPV AIALDINLVW
FAILISMNLQ TSFLTPPFGF SLFYLKGVAP KYLKTTTIYK GVIPFILMQI AVLLLVVFFP
EHLIIT
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