| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_0129 |
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| Symbol | |
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| ID | 3522916 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 134739 |
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| End bp | 135827 |
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| Gene Length | 1089 bp |
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| Protein Length | 362 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 637282596 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_266897 |
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| Protein GI | 71282442 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4663] TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.189544 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAT CAATTTTCGT AAAAGCTGCA CTGGTCGTGT CGCTTGGATT ATCCTCGCTG
GGGCTTTCAG CTTTAGCCCA TGCTGACGAT GATAAAAAAT ATCGTTGGAA ATTAGCTGAA
ACTTGGGGAC CTAATTTTCC TATTTTTGGT GATGCCACTA AAAATATGGC CAAAATGGTA
AAAGAAATGT CGAATGGTCG GTTGACCATA CGCATTGATT CTTCGAATAA GCATAAATCT
GCATTAGGTA TTTTTGACTT TGTAAAAAGT GGCCAATATC AAATGGGTCA TTCTGCGTCT
TATTATTGGA AAGGTAAAAA CTTCAACACC ATGTTTTTTA CTACCGTACC TTTTGGCATG
ATAGCCTCTG AACAACATGC TTGGTTTTAC TACGGTGGTG GCATGGAGTT AATGAAAAAG
GTTTATGATC AATATGGCAT CATGTCATTC CCTGGTGGTA ATACGGGTAA CCAAATGGGC
GGTTGGTTCA AAAAAGAAAT TAATAGCGTT GAAGATCTGA AAGGTTTGAA AATGCGCATA
CCAGGTTTTG CTGGTGAAGT ATTAGCAAAA CTAGGTGCGA AGCCGACAAA CATTCCATCA
GGTGAGCTTT ATACGGCATT GGAACGTAAC ACTATTGATG CATTAGAGTG GGTAGGTCCT
TCTTTAGATT TACGTATGGG TTTTCATAAA ATAGCGCCTT ATTACTACAC AGGTTGGCAT
GAGCCAGGTA CTGAGTTGCA ATTTATGGTC AATCAAAAAG CCTACAATTC CCTACCAAAA
GATTTACAAA AAATATTAAC GGTTGCTATG AAAGCTGCAG CTTATGATAT GTATTCGCAA
TCGATGCACG CTAGTGGTGT GAACTTAGCA TCACTGAAAA AAGATTACCC AAATGTGCAA
ATGCGCTCAT TCCCTAAACC GGTAATGGAA GCGATTGTGC AAGCAAATGA TGAGTTATTA
GAAGAGTTTG CTGCTAAAGA TCCTATGACA GCAGAAATTC TTAAGTCACT AAATGATTAT
AAGCACCAAA TACGTGCTTG GACTAATTTA TCAGATAGAG CTTATCTGGA TAATTTTGAT
GGCAAGTAA
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| Protein sequence | MKKSIFVKAA LVVSLGLSSL GLSALAHADD DKKYRWKLAE TWGPNFPIFG DATKNMAKMV
KEMSNGRLTI RIDSSNKHKS ALGIFDFVKS GQYQMGHSAS YYWKGKNFNT MFFTTVPFGM
IASEQHAWFY YGGGMELMKK VYDQYGIMSF PGGNTGNQMG GWFKKEINSV EDLKGLKMRI
PGFAGEVLAK LGAKPTNIPS GELYTALERN TIDALEWVGP SLDLRMGFHK IAPYYYTGWH
EPGTELQFMV NQKAYNSLPK DLQKILTVAM KAAAYDMYSQ SMHASGVNLA SLKKDYPNVQ
MRSFPKPVME AIVQANDELL EEFAAKDPMT AEILKSLNDY KHQIRAWTNL SDRAYLDNFD
GK
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