Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_0121 |
Symbol | tdh |
ID | 3522837 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 126942 |
End bp | 127967 |
Gene Length | 1026 bp |
Protein Length | 341 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637282588 |
Product | L-threonine 3-dehydrogenase |
Protein accession | YP_266889 |
Protein GI | 71282364 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases |
TIGRFAM ID | [TIGR00692] L-threonine 3-dehydrogenase [TIGR01202] 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATCTT TAGCTAAATT AAAAGCAGAA CCGGGCATTT GGTTAACGCG AACCGAAAAA CCAAAACTAG GTCATAATGA TCTGCTAATC AAAATTAAAA AAACGGCCAT TTGTGGTACA GATATCCACA TTTATAATTG GGATGAATGG GCACAAAAAA CAGTGCCTAC GCCTATGGTT GTTGGACATG AGTACGCAGG TGAAGTGGTT GGTATCGGCC AAGAAGTTAA AGGCTTTACT TTAGGTGACC GGGTTTCTGG TGAAGGCCAT ATTACTTGTG GTCATTGCCG TAATTGTCGT GGTGGCAGAA CTCATTTATG TCGTAATACC GTTGGTGTTG GGGTCAATCG TGCGGGGTCA TTTGCAGAGT ATCTAGTGAT ACCTGCATAC AATGCCTTTA AATTACCTGA CGAAATTTCT GATGATTTAG CGTCAATTTT TGACCCCTTT GGTAATGCAG TTCATACCGC ATTGTCATTT GATTTAGTGG GTGAGGATGT ATTAATCACC GGTGCTGGCC CTATTGGTAT TATGGCTGCA GCCGTTGCTA AACATGTAGG TGCTCGTCAT GTCGTTATTA CCGATATTAA CGAATATCGT CTTGACCTTG CAAGAAAAAT GGGCGCTACT CGTGCTGTTG ATGTGAGTAA AGAAAGCTTA AAAGATGTCA TGACCGATTT GGGGATGACC GAGGGTTTTG ATGTTGGTAT GGAAATGTCA GGTGTTCCAA TGGCATTCAC TAGCATGTTA GAAAGCATGA ATAATGGTGG TAAAATTGCC ATGCTGGGTA TTCCTGGTAG CGATATGGCT ATTGATTGGA GCCAAGTTAT TTTTAAAGGG CTTACCATTA AAGGTATTTA TGGTCGTGAA ATGTTCGAAA CTTGGTATAA GATGGCAAGT TTGATTCAAT CTGGTTTAGA TCTCACCCCG ATTATTACCC ATCACTACAA TATCGATGAC TTTCAGCAAG GCTTTGATAT GATGCGTTCT GGTCAATCTG GCAAGGTCAT TTTAGATTGG ACTTAA
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Protein sequence | MKSLAKLKAE PGIWLTRTEK PKLGHNDLLI KIKKTAICGT DIHIYNWDEW AQKTVPTPMV VGHEYAGEVV GIGQEVKGFT LGDRVSGEGH ITCGHCRNCR GGRTHLCRNT VGVGVNRAGS FAEYLVIPAY NAFKLPDEIS DDLASIFDPF GNAVHTALSF DLVGEDVLIT GAGPIGIMAA AVAKHVGARH VVITDINEYR LDLARKMGAT RAVDVSKESL KDVMTDLGMT EGFDVGMEMS GVPMAFTSML ESMNNGGKIA MLGIPGSDMA IDWSQVIFKG LTIKGIYGRE MFETWYKMAS LIQSGLDLTP IITHHYNIDD FQQGFDMMRS GQSGKVILDW T
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