| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_0118 |
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| Symbol | kdtA |
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| ID | 3520081 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 123639 |
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| End bp | 124994 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637282585 |
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| Product | 3-deoxy-D-manno-octulosonic-acid transferase |
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| Protein accession | YP_266886 |
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| Protein GI | 71279622 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1519] 3-deoxy-D-manno-octulosonic-acid transferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCGATATG TTTTAGCTTT ATTTTTTTAC CGTGTATTCC TTTTATTGCT CACCCCAATA
GTTTTACTTG TGCTATTAAT CCGCTCATTT AATCACCCTG AATACCGCCA ACGTTTATTT
GAACGCTTAG GCTTTTTTCC TAAGCCCTAT AAGCAAGGTG GTATTGTTGT GCATGCTGCC
AGTGTCGGTG AAGTCATCGC ACTAAAAAGT TTTATCGAAA AATTATTAGT AAACTATCCA
GATTTACCCA TCACCATCAC TTCATTTACC CCGACTGGCT CTGCGCAAAT AACCAAACTC
TTTGGTCGAC GTGTTCAGCA TGGTTATTTA CCGTTAGATA TATTTCCCTG CACAACATTA
TTTCTACATC GGCTTAAACC TAAAATGATA ATTTTCATGG AAACCGAGTT ATGGCCTAAC
TTAATTGCTC AATGCGACCA ACACCAGATT AAATTATTGC TAATTAACGG CCGCTTATCT
AAAAAATCCT TAACCAGTTA TCAAAAACTT AGTGCGCTTA TGGCGCCCTG CTTAAATCGC
TTTGATATGA TCCTCACGCA AAGCCAAGAA AATTTAACTC ACTTTTTGCA GCTCGGTGCG
CATCAAAGCC GTTGTGTGAA TAGTGGCAAT TTAAAATTCG ATATCAGTGT CAATGAACAA
GTTATCAATA AAAAGGCCGA GTTAGCCAAG TTACTTTTTG CTGATGATAG TCAGGCCAAA
AGAACAGTCT GGTTAGTTGC CAGTACACAC GAGGGCGATG AAGCCATTAC CTTAACCGCC
TTTAAAGAAT TGTTATCTCA ATATCCATCA TTGTTATTAG TGCTAGTACC GCGCCATCCA
GAACGTTTTG AGCAAGTCGC CAATCTTTGC CTTACAAAAC AATTATCACT GGCTAAACGC
AGTGAAAATA CGATAATTAA TAATGAGCAA GTGTGGTTGC TGGATAGCCT TGGCGAGTTA
ATGGCTGCCT TTGCTTTAAG TGATATTGTC ACTATGGGTG GTAGTTTCAG TGAAGTGGGT
GGTCATAACC CGTTAGAACC AGCATTATTT AATAAGCCTG TTATTGTTGG TCACAACATG
AGCAACTTCA ACGAAATAAT GCAGCAGCTA AGACAAGAAA ATGCCATTAT TGAACTTACT
AACAATACAC CGACTAATGA ATCTAGCGCA CAACTTGTCA ATGAAGTTAG CGCATTATTG
CAACAACCAA CTCGGCAGAA AACGCTTGGC GAAAATGCGC TTAAAGTGGT ACTAAAAAAC
CAAGGAGCCA GTGAAAAAAC GTTGGCTCAA GTAGTAAACC TTCTGCCCAC TAGGGTTAAT
ATTACCAGCA CTACACCATT AGGAGATAAC TCGTGA
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| Protein sequence | MRYVLALFFY RVFLLLLTPI VLLVLLIRSF NHPEYRQRLF ERLGFFPKPY KQGGIVVHAA
SVGEVIALKS FIEKLLVNYP DLPITITSFT PTGSAQITKL FGRRVQHGYL PLDIFPCTTL
FLHRLKPKMI IFMETELWPN LIAQCDQHQI KLLLINGRLS KKSLTSYQKL SALMAPCLNR
FDMILTQSQE NLTHFLQLGA HQSRCVNSGN LKFDISVNEQ VINKKAELAK LLFADDSQAK
RTVWLVASTH EGDEAITLTA FKELLSQYPS LLLVLVPRHP ERFEQVANLC LTKQLSLAKR
SENTIINNEQ VWLLDSLGEL MAAFALSDIV TMGGSFSEVG GHNPLEPALF NKPVIVGHNM
SNFNEIMQQL RQENAIIELT NNTPTNESSA QLVNEVSALL QQPTRQKTLG ENALKVVLKN
QGASEKTLAQ VVNLLPTRVN ITSTTPLGDN S
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