| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_0117 |
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| Symbol | kdkA |
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| ID | 3521891 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 122866 |
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| End bp | 123642 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637282584 |
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| Product | 3-deoxy-D-manno-octulosonic-acid kinase |
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| Protein accession | YP_266885 |
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| Protein GI | 71281419 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3642] Mn2+-dependent serine/threonine protein kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGAGTCAAA CAATAACCAG CGCACAATTT TCTAAGTTCG AACAAGGTAA CGTTACTTGT
GTTTACAACC AAACACTGAT CACTAATTTC AATGCAGCAA TGCTTAGTCC GAGTTATTGG
CAACAAAGTA ACGCCGTAAC GGGCTCAGCA CAAGGGCGTG GCACCACTTG GTTTGTCGAA
TACAATGATA ACAGCAATAC TCCGCATGAT TGGGTATTAC GCCATTATTA CCGCGGTGGG
TTGATCGGTA AAATTATTAA AGATTCCTAT TGGTTTAGCG GCGTAGAAAA AACTCGCGCT
GCATGTGAGT TTGCTTTATT ACGTCATATG AATACGCTAC AACTTCCTAC TCCTGAGCCA
ATCGCTTATC GCGTTATGCA ACATGGCTTT CACTATCAAG CAGACTTGCT TTCCAGTCGA
ATTGAACATG CTCAAGACTT AGTGGCAATA TTAAGTGAAA AGGCGTTAAC TGATGATATT
TGGCACAACA TAGGTGCCAC AATTAAACGC TTTCACCAGC ACGGTATTTA TCACCATGAT
TTGAATAGCC ATAATATTTT GCTGAATGAC AAGAAACAGG TGTTTTTGAT CGACTTTGAC
CGTGGTGAAT TACGCACTAA CCCTGTTGAG ACTAACTGGA AGCAAGCCAA CATGGCGCGT
TTACAACGTT CTTTTTTAAA GGAATTAAAT AAACTGGAGC AGTTCAATTT TACCGAACAA
AACTGGCAAG CGTTGAAGGA TGGCTATCAG GATGCCGATG TTGAAAGGCA GAACTAA
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| Protein sequence | MSQTITSAQF SKFEQGNVTC VYNQTLITNF NAAMLSPSYW QQSNAVTGSA QGRGTTWFVE
YNDNSNTPHD WVLRHYYRGG LIGKIIKDSY WFSGVEKTRA ACEFALLRHM NTLQLPTPEP
IAYRVMQHGF HYQADLLSSR IEHAQDLVAI LSEKALTDDI WHNIGATIKR FHQHGIYHHD
LNSHNILLND KKQVFLIDFD RGELRTNPVE TNWKQANMAR LQRSFLKELN KLEQFNFTEQ
NWQALKDGYQ DADVERQN
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