Gene CPS_0113 details

Gene Information

• Locus tag: CPS_0113
• Symbol: pyrE
• ID: 3518787
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Colwellia psychrerythraea 34H
• Kingdom: Bacteria
• Replicon accession: NC_003910
• Strand: +
• Start bp: 119779
• End bp: 120444
• Gene Length: 666 bp
• Protein Length: 221 aa
• Translation table: 11
• GC content: 40%
• IMG OID: 637282580
• Product: orotate phosphoribosyltransferase
• Protein accession: YP_266881
• Protein GI: 71278609
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0461] Orotate phosphoribosyltransferase
• TIGRFAM ID: [TIGR00336] orotate phosphoribosyltransferase

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAGATT ATCAACGCGA GTTTATTGAA TTTGCGATAG AAAAACAGGT ATTACGCTTT 
GGTGAGTTCA CCTTAAAGTC TGGCCGAGTG AGTCCTTACT TTTTTAATGC GGGTATGTTC 
AAAACCGGCG GTGATTTAGC GCGTTTAGGT CGTTTTTATG CGGCTACGTT AATGGATGCA 
AAAATTGATT TTGATTTAGT ATTTGGTCCT GCTTATAAAG GCATTCCAAT TGCGACTACG 
ACGACGGTTG CGCTGTACGA TCACCACAAT GTAGATGTGC CTTATTGCTT TAACCGTAAA 
GAAGCAAAAA CTCATGGTGA AGGTGGTTCA TTGGTGGGCG CAGAGCTTGA AGGTAAAATC 
ATGTTAGTTG ATGATGTTAT TACCGCAGGC ACAGCCATTC GTGAATCAAT GGAAATTATT 
AAAGCACATG GTGCCCAGCT TTCGGGTGTA TTAATTGCCC TAGATCGTCA AGAAAAAGGC 
CAAGGTCAAC TTTCAGCAAT TCAAGAAGTT GAACGCGATT TTGGTACACA AGTGGCGGCA 
ATTGTTACCT TAGGTGATGT AGTGACCTAT CTAGAAGAAA AGCTAGAAGG AAAAGTAGCA 
AACCAACCTG AATTAGCAGA AAACTTAGCA AGCATTAAAA AATATCGTTT AAATTATGGT 
ATCTAA 

 

Protein sequence

MKDYQREFIE FAIEKQVLRF GEFTLKSGRV SPYFFNAGMF KTGGDLARLG RFYAATLMDA 
KIDFDLVFGP AYKGIPIATT TTVALYDHHN VDVPYCFNRK EAKTHGEGGS LVGAELEGKI 
MLVDDVITAG TAIRESMEII KAHGAQLSGV LIALDRQEKG QGQLSAIQEV ERDFGTQVAA 
IVTLGDVVTY LEEKLEGKVA NQPELAENLA SIKKYRLNYG I