Gene CPS_0112 details

Gene Information

• Locus tag: CPS_0112
• Symbol: rph
• ID: 3519509
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Colwellia psychrerythraea 34H
• Kingdom: Bacteria
• Replicon accession: NC_003910
• Strand: +
• Start bp: 119037
• End bp: 119750
• Gene Length: 714 bp
• Protein Length: 237 aa
• Translation table: 11
• GC content: 42%
• IMG OID: 637282579
• Product: ribonuclease PH
• Protein accession: YP_266880
• Protein GI: 71278026
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0689] RNase PH
• TIGRFAM ID: [TIGR01966] ribonuclease PH

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGTCCAA GCGGCAGAAC ATTAGGGCAA ATTCGCCCCG TAACTATTAC TCGTCAATTT 
ACTACTCATG CAGAAGGCTC AGTACTTATT GAGTTTGGCG ATACTAAAGT AATTTGTACT 
GCGACCGTTG AAGTTGGCGT ACCACGTTTC TTAAAAGGCC AAGGTAAAGG TTGGGTTACT 
GCTGAATACG GTATGTTACC TCGCTCTACA CATACACGTA TGCGTCGCGA AGCTGCTTCC 
GGCAAGCAAA GTGGTCGTAC GTTAGAGATT TCTCGCTTAA TTGCTCGTGC ATTACGTGCA 
GCAGTTGATT TAAAAGCCTT AGGCGAAAAT ACCATTTCAG TTGATTGTGA TGTTATTCAA 
GCTGATGGTG GTACACGTAC CGCTGCTATT ACCGGTGCTT GTGTTGCGCT AGTTGATGCA 
CTTAACTATA TGCGTGCTAA AGATATTATT AAAACTAATC CACTTAAGCA TATGATTGCT 
GCAGTATCTG TTGGTATTTA TAAAGGCGAA CCCGTAGCAG ATTTAGATTA CCCAGAAGAT 
TCAGCTGCTG ATACCGATAT GAATGTTGTT ATGACAGATA CCGGTAAGCT TATTGAAGTA 
CAAGGTACGG CTGAAGAAGA ACCGTTTAGC TTTGAAGAAA TGCAAGCGAT GCTTGAGTTG 
GCTAAAAATG GTATCAACGA ATTATTCGAC CTACAAAAAG CAGCATTAAG CTAA 

 

Protein sequence

MRPSGRTLGQ IRPVTITRQF TTHAEGSVLI EFGDTKVICT ATVEVGVPRF LKGQGKGWVT 
AEYGMLPRST HTRMRREAAS GKQSGRTLEI SRLIARALRA AVDLKALGEN TISVDCDVIQ 
ADGGTRTAAI TGACVALVDA LNYMRAKDII KTNPLKHMIA AVSVGIYKGE PVADLDYPED 
SAADTDMNVV MTDTGKLIEV QGTAEEEPFS FEEMQAMLEL AKNGINELFD LQKAALS