| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_0103 |
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| Symbol | potF1 |
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| ID | 3518986 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 109086 |
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| End bp | 110195 |
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| Gene Length | 1110 bp |
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| Protein Length | 369 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637282570 |
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| Product | putrescine ABC transporter, periplasmic putrescine-binding protein |
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| Protein accession | YP_266871 |
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| Protein GI | 71278418 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGACTTT TTAAAAAAGC AACAGTAACA GCAATGGCAT TGATAAGTGC CGGAATATTT
GTGGGTAGCG TTAGTGCTAG TGAAGAACAA GTAGTCAAAA TGTATAACTG GTCCGATTAT
GTTGCCGAAG ATACATTGGA AAATTTTAGA AAAGAAACCG GAATTCGGGT TATTTACGAC
GTATTCGACA GTAATGAGGT ACTAGAAGCT AAACTACTTT CAGGTCGCTC TGGCTATGAT
ATTGTGGTGC CGTCAAACAG CTTCTTGACC AAACAAATTA AAGCGGGTGT GTATAGTAAA
CTAAACCGTG ATCAGTTAAC TAACCATAGT AACCTAGATC CTGAATTAAT GAGCAAGTTG
CAAACAGCCG ATCCAGGCAA TCAACATGCG GTTCCTTACT TATGGGGCAC CAATGGTATT
GGTTATAATG TTGCTCAAGT TAAAGCTGCA TTAGGCGATG ACGCACCGAC TGATTCTCTA
GAGCTTATTT TTAACCCTAA ATATGCTGAA AAATTGGGGA AGTGTGGTCT AGCCGTTCTT
GATTCGCCAG ATGAAATGAT TCCACAGGCA CTGCTCTATT TAGGACTCAA TCCAAATAGC
CACAAGGCAA GTGACTATAA AGCGGCGGGT AAATTGTTAG CTGAAATACG TCCTCATATT
ACTTACTTCC ATTCTTCACG TTACATTACA GATTTAGCCA ATGGCGATAT CTGTGTTGCT
TATGGATTCT CTGGTGATGT ATTCCAAGCT AAAGCACGTG CAGAAGAAGC TGGAAATGGT
CACATCATTG AGTATAAAAT TCCTAAAGAA GGAGCGAATC TTTGGTTTGA TATGTTAGCC
ATCCCTAAAG ATGCGCCGAA CAAAGAAAAT GCTCATAAGT TTGTTAATTA CCTACTACGA
CCGGACGTCA TTGCAGGCAT AACTAACTAT GTTGCCTATG CAAACGGTAA CGTGGCATCG
ACGAAATTAA TCGATAAAGA AGTTCGTGAA AACCCTGCCA TTTATCCTTC TGACGATGTA
ATTAATAATT TGTATATCCA AGAAGTTCGT CCATTGAAAG CGCAGCGTGC TATGACCCGC
GTTTGGACAG GGGTGAAAAC TGGTCGTTAA
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| Protein sequence | MRLFKKATVT AMALISAGIF VGSVSASEEQ VVKMYNWSDY VAEDTLENFR KETGIRVIYD
VFDSNEVLEA KLLSGRSGYD IVVPSNSFLT KQIKAGVYSK LNRDQLTNHS NLDPELMSKL
QTADPGNQHA VPYLWGTNGI GYNVAQVKAA LGDDAPTDSL ELIFNPKYAE KLGKCGLAVL
DSPDEMIPQA LLYLGLNPNS HKASDYKAAG KLLAEIRPHI TYFHSSRYIT DLANGDICVA
YGFSGDVFQA KARAEEAGNG HIIEYKIPKE GANLWFDMLA IPKDAPNKEN AHKFVNYLLR
PDVIAGITNY VAYANGNVAS TKLIDKEVRE NPAIYPSDDV INNLYIQEVR PLKAQRAMTR
VWTGVKTGR
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