Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_0098 |
Symbol | mmsA1 |
ID | 3519515 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 104755 |
End bp | 106251 |
Gene Length | 1497 bp |
Protein Length | 498 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637282565 |
Product | methylmalonate-semialdehyde dehydrogenase |
Protein accession | YP_266866 |
Protein GI | 71277993 |
COG category | [C] Energy production and conversion |
COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
TIGRFAM ID | [TIGR01722] methylmalonic acid semialdehyde dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATGAAG TAAATGTAAT AGGCCATTTA ATCAATGGTG AAATGGTTAA TGATGATGTG CGCACACAAG CAGTCTTTAA TCCTGCTACC GGCGCTGCAG AAAAGAAAGT CGCTTTAGCG TCAAAGCAAA CGGTTGAACA GGCCATTTCA GCGGCTCAGA CAGCCTTCCC CGCATGGCGT AATACCCCGG CAATAAAGCG CGCACGGGTG ATGTTTCGTT TCAAAGAATT ATTAGAACAA CATGCCGATA CTATCTGTCG ACTCATTGGT GAAGAGCACG GAAAAATATC ACACGATGCT GCCGGTGAAT TACAACGCGG TATTGAAAAC GTTGAGTACG CCTGTGGTGC ACCTGAGTTA CTCAAAGGCG AGCACAGCAA AAACGTTGGC CCAAACATTG ATTGTTGGAG TGAGTTTCAA CCGTTAGGTG TTGTTGCCGG TATTACCCCG TTTAACTTCC CTGCCATGGT TCCTATGTGG ATGTTCCCAT TGGCAATCGT GTGCGGTAAT TGTTTTATCT TAAAACCATC AGAGCGTGAC CCAAGTTCAA CCTTGTATAT CGCCCAGTTA TTAAAAGAAG CAGGCTTACC TGATGGCGTA ATGAACGTCG TAAACGGTGA TAAAGAAGCG GTCGATGTGT TATTAAGTGA CGAGCGCATT AAAGCAGTGA GTTTTGTTGG CTCAACACCC ATTGCTGAGT ACATTTACGC CACCGCTAAT GCCAATGGCA AACGCTGTCA GGCACTGGGC GGCGCTAAAA ATCACGCCAT CATTATGCCC GACGCTGACA TGGACAATGC GGTCAATCAA CTACTTGGTG CTGCCTTTGG CTCATCAGGA GAGCGCTGCA TGGCGTTATC TGTTGCGGTT GCTGTCGGTG ATGAAGCGGC TGATGCCTTA GTAGAGAAAA TGACAGAAGC GATGAAAAAC TTAAGTGTTG GCGCTCATGA CAAGGCCAGT AATGATTTTG GTCCGGTCAT TACGCAAGCG CATAAAGACA AAGTCGAAGG CTATATCACC AGCGCCCAAA ATCAGGGAGC AACCATTGTT GTCGATGGTC GCCAACCACA CGTTGAAGGT TATGAAAATG GCTTCTTCGT TGGCGCCACC TTAATTGACG GTGTTACTGC TGACATGGAC AGTTACGTTG CTGAAATCTT TGGTCCGGTA TTACAAGTGA TGCGCGTTAA AACCATGCAA GAAGCAATGC AGTTAATTAA CGACCATGAA TACGGCAATG GTACCTGTAT CTTTACCCGT GATGGAGAAG CAGCGCGTTA TTTCTCAGAT AACATTCAGG TCGGTATGGT AGGCATTAAT GTGCCACTAC CCGTGCCTGT TGCTTATCAT AGTTTCGGGG GCTGGAAGCG CTCATTATTT GGTGACTTAC ATGCTTATGG CCCAGATGGC GTTCGTTTTT ATACCAAACG TAAAACCATC ACGCAACGCT GGCCTTCAAG TGGCGTGCGT GAAGGCGCAA GTTTTGCATT TGCTTAG
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Protein sequence | MNEVNVIGHL INGEMVNDDV RTQAVFNPAT GAAEKKVALA SKQTVEQAIS AAQTAFPAWR NTPAIKRARV MFRFKELLEQ HADTICRLIG EEHGKISHDA AGELQRGIEN VEYACGAPEL LKGEHSKNVG PNIDCWSEFQ PLGVVAGITP FNFPAMVPMW MFPLAIVCGN CFILKPSERD PSSTLYIAQL LKEAGLPDGV MNVVNGDKEA VDVLLSDERI KAVSFVGSTP IAEYIYATAN ANGKRCQALG GAKNHAIIMP DADMDNAVNQ LLGAAFGSSG ERCMALSVAV AVGDEAADAL VEKMTEAMKN LSVGAHDKAS NDFGPVITQA HKDKVEGYIT SAQNQGATIV VDGRQPHVEG YENGFFVGAT LIDGVTADMD SYVAEIFGPV LQVMRVKTMQ EAMQLINDHE YGNGTCIFTR DGEAARYFSD NIQVGMVGIN VPLPVPVAYH SFGGWKRSLF GDLHAYGPDG VRFYTKRKTI TQRWPSSGVR EGASFAFA
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