Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_0064 |
Symbol | |
ID | 3522040 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 63625 |
End bp | 64536 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 637282531 |
Product | hypothetical protein |
Protein accession | YP_266832 |
Protein GI | 71281568 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0510] Predicted choline kinase involved in LPS biosynthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGCTTA CCTCTTCACA ACTTAACTCA CTCAGATCCC TACCTTGTTT TGAAAAGGTA GTAGATATTT CATTGTTGAT TGATGGCATG AGTCACACCT GCATTAAAGT GACGACTGCC TTACAGGTTT TTTTTGTAAA AAAATTAAAT AGTGAAACTG CTGAAACAGA GGTTTTATCT AGCAAATATG CAGCTAAACA TGGCCTAAGC CCAAGAATTA TCTACCATGA CAATGCTTGG TTAGTCACTG ACTATATTGT GGGTATTACA CTGGATAAAA ATGAACTTAG CAGTAGTCAG TGTATTGATA CTGGCCTAAC TCTCATGGCT AAATTACATC AGTTAGTACC ACAACCGAAT GCTAAAACTA TTCCCTGTTT AGATACTTCT GAGTCAGTAC GGCGCTTATT CACTAACCCC AACTCAATAC CATCACAACA AAAACTTTTC TTAGCAGACA TCACTGAAAC ACTGACTTTA AAGATTGGTA TCGAACAGAA GCGCTCTGAT GTCACTAATA TTATTTGCCA TGGTGATATA AATTACAGCA ATATTATTAT TGATGAAACG CGACAATCTT GGTTAATAGA TTTCGAATGT AGCCATTTAG CACCGGTAGA TTTCGACTTA TCAATGTTCA TTGCTATTAA TAACATTTCA CCTCTCCACA TAGATGAGAT TGTTAATCGC TATATGTCCT TAGTACCAAG TTACAAGCCG AATAAAATAT TATTAACTTA CTATCTTCTT TATAGCTACT TTATAAATGG CTTATGGTAT TTAGATAATA CAAATGATGC AAAAATTAAT AATCATTTGA GATCACTAGC TATTGAACAA TGGTCAGCAT TCGATAGTTT TGTGGTAAAA TATCACTTAG ATATACCAAA ATTAATGCCG TTAATAAGTT AA
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Protein sequence | MSLTSSQLNS LRSLPCFEKV VDISLLIDGM SHTCIKVTTA LQVFFVKKLN SETAETEVLS SKYAAKHGLS PRIIYHDNAW LVTDYIVGIT LDKNELSSSQ CIDTGLTLMA KLHQLVPQPN AKTIPCLDTS ESVRRLFTNP NSIPSQQKLF LADITETLTL KIGIEQKRSD VTNIICHGDI NYSNIIIDET RQSWLIDFEC SHLAPVDFDL SMFIAINNIS PLHIDEIVNR YMSLVPSYKP NKILLTYYLL YSYFINGLWY LDNTNDAKIN NHLRSLAIEQ WSAFDSFVVK YHLDIPKLMP LIS
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