| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_0060 |
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| Symbol | atpA |
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| ID | 3520920 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 59019 |
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| End bp | 60560 |
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| Gene Length | 1542 bp |
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| Protein Length | 513 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637282527 |
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| Product | ATP synthase F1, alpha subunit |
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| Protein accession | YP_266828 |
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| Protein GI | 71280454 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0056] F0F1-type ATP synthase, alpha subunit |
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| TIGRFAM ID | [TIGR00962] proton translocating ATP synthase, F1 alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAACTGA ATTCCACTGA AATCGCTGAA CTGATCAAGA ATAGAATTGA ACAGTTTAAC
GTTGTCAGCG AAGCTCGCAA CGAAGGTACT ATCGTTTCTG TAACAGATGG TATCATTCGT
ATCAATGGCC TTGCCGATGT AATGCAAGGT GAAATGATCG AACTTCCTGG TAGCCGTTTT
GCTATCGCGT TAAACCTAGA CCGTGATTCG GTAGGTGCGG TAGTAATGGG CCCTTACGCT
GATTTAGCGG AAGGCCAAAA AGTTAAAGGT ACTGGTCGTA TTTTAGAAGT ACCAGTAGGT
CGTGGTTTAT TAGGCCGCGT AGTAAACACT TTAGGTGAAC CAATTGATGG CAAAGGCCCA
ATTGAAAATG ATGGCTTCTC TCCAGTAGAA GTTATTGCAC CAGGTGTTAT CGATCGTAAA
TCCGTTGACG AACCAGTTCA AACTGGTATC AAGTCAATTG ATGCTATGAT TCCAATTGGT
CGTGGACAGC GTGAATTAAT CATTGGTGAC CGTCAAATCG GTAAATCAGC GATTGCACTT
GACGCTATCA TCAACCAAAA GAACACAGGT ATTAAAAGTA TTTATGTTGC TATCGGTCAG
AAAGCTTCTA CCGTTGCAAA CGTTGTACGT AGCTTAGAAG AGCACGGCGC GTTATCAAAT
ACTATTGTTG TTGTTGCCTC AGCTTCTGAA GCTGCTGCAC TACAATACCT AGCTCCATAT
GCTGGTTGTT CAATGGGTGA ATACTTCCGT GATCGCGGTG AAGATGCACT AATCGTATAT
GATGATTTGT CTAAGCAAGC TGTTGCTTAC CGTCAAATTT CATTACTTTT ACGTCGTCCG
CCAGGTCGTG AAGCGTACCC AGGTGACGTT TTCTATCTTC ATAGTCGTTT ATTAGAACGT
GCTGCTCGTG TAAACGAAGC ATACGTTGAA AAATTCACTA ACGGTGAAGT TAAAGGTAAA
ACAGGTTCAT TAACTGCCTT ACCAATTATT GAAACGCAAG CGGGTGATGT ATCTGCTTTC
GTACCAACTA ACGTAATCTC AATTACCGAT GGTCAGATTT TCTTACAATC AGATCTATTT
AACTCAGGCA TACGTCCTGC TGTTAATGCT GGTATTTCAG TATCTCGTGT TGGTGGTGCT
GCGCAAACTA AAATCATCAA GAAACTTGGT GGTGGTATTC GTTTAGCATT GGCTCAATAC
GCTGAATTAG CAGCTTTCGC TCAATTCGCA TCTGATTTAG ATGACGCGAC TCGTGCTCAA
TTAGAGCATG GACAACGCGT AACAGAATTA ATGAAGCAGA AGCAGTACAG CCCATTATCA
ATTGCAGAAA CAGCGGTATC ATTATTTGCT GCTGAAAAAG GTTTCTTAAA CGACGTTGCT
ATAAACAAGG TTGTTGATTT TGAAGAAGCT CTACATGCAT ACATGAGTAA TGAGCAAGCT
GCGTTGATGG CTACTATCAA CGAAAAGGGT GATTACAATA AAGATATCGA AGCTAGTTTG
AAAACAGCAC TTGAAAATTT CAAGTCTACT CAAACTTGGT AA
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| Protein sequence | MQLNSTEIAE LIKNRIEQFN VVSEARNEGT IVSVTDGIIR INGLADVMQG EMIELPGSRF
AIALNLDRDS VGAVVMGPYA DLAEGQKVKG TGRILEVPVG RGLLGRVVNT LGEPIDGKGP
IENDGFSPVE VIAPGVIDRK SVDEPVQTGI KSIDAMIPIG RGQRELIIGD RQIGKSAIAL
DAIINQKNTG IKSIYVAIGQ KASTVANVVR SLEEHGALSN TIVVVASASE AAALQYLAPY
AGCSMGEYFR DRGEDALIVY DDLSKQAVAY RQISLLLRRP PGREAYPGDV FYLHSRLLER
AARVNEAYVE KFTNGEVKGK TGSLTALPII ETQAGDVSAF VPTNVISITD GQIFLQSDLF
NSGIRPAVNA GISVSRVGGA AQTKIIKKLG GGIRLALAQY AELAAFAQFA SDLDDATRAQ
LEHGQRVTEL MKQKQYSPLS IAETAVSLFA AEKGFLNDVA INKVVDFEEA LHAYMSNEQA
ALMATINEKG DYNKDIEASL KTALENFKST QTW
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