Gene CPS_0059 details

Gene Information

• Locus tag: CPS_0059
• Symbol: atpH
• ID: 3522532
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Colwellia psychrerythraea 34H
• Kingdom: Bacteria
• Replicon accession: NC_003910
• Strand: +
• Start bp: 58470
• End bp: 59003
• Gene Length: 534 bp
• Protein Length: 177 aa
• Translation table: 11
• GC content: 39%
• IMG OID: 637282526
• Product: ATP synthase F1, delta subunit
• Protein accession: YP_266827
• Protein GI: 71282060
• COG category: [C] Energy production and conversion
• COG ID: [COG0712] F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein)
• TIGRFAM ID: [TIGR01145] ATP synthase, F1 delta subunit

Plasmid Coverage information

• Num covering plasmid clones: 25
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCTGAAT TGACAACTGT CGCTCGTCCT TACGCTAAAG CAGCGTTCGA ATTTGCTGTT 
GAAGCTAAAG CAATAGATAG CTGGCTAGTC CAGTTAACTT TTGCTGCTGA AGTTGCTAAA 
GATGAAACCA TCAAAGGTTT TTTATCTAGT GGTGCTTCAG TAGAGCAAGC ACAAACATTA 
TTTTTAAATG TTTGTGGTGA GCAAGTAGAC AGTCAAGGCC AAAACTTTTT GAAAGTAATG 
GCAATAAACG AACGTTTGTT GGTGCTACCA CAGGTTCTTG AGCAATTTAT AGCGTTAAAA 
GCTGATTTTG ACCAAGAAGT TTCTGTGGAT GTAACCTCTG CTGTTGAAGT AACAGCAGAG 
CAAAAAACAA CATTAAGCGC CGCGCTTGAA AAGCGCTTGG CACGTAAAGT AAAGCTTAAT 
TGTTTTGTTG ATGCGAGTAT CGTCTCCGGT TTAGTTATAA AAGCTGGTGA CATGGTAATA 
GATGGTTCAA TCAAAGGTAA ACTGAACCGC TTAGCAACAA CATTACAATC TTAG 

 

Protein sequence

MSELTTVARP YAKAAFEFAV EAKAIDSWLV QLTFAAEVAK DETIKGFLSS GASVEQAQTL 
FLNVCGEQVD SQGQNFLKVM AINERLLVLP QVLEQFIALK ADFDQEVSVD VTSAVEVTAE 
QKTTLSAALE KRLARKVKLN CFVDASIVSG LVIKAGDMVI DGSIKGKLNR LATTLQS