Gene CPS_0058 details

Gene Information

• Locus tag: CPS_0058
• Symbol: atpF
• ID: 3520511
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Colwellia psychrerythraea 34H
• Kingdom: Bacteria
• Replicon accession: NC_003910
• Strand: +
• Start bp: 57987
• End bp: 58457
• Gene Length: 471 bp
• Protein Length: 156 aa
• Translation table: 11
• GC content: 40%
• IMG OID: 637282525
• Product: ATP synthase F0, B subunit
• Protein accession: YP_266826
• Protein GI: 71280048
• COG category: [C] Energy production and conversion
• COG ID: [COG0711] F0F1-type ATP synthase, subunit b
• TIGRFAM ID: [TIGR01144] ATP synthase, F0 subunit b

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATATTA ATATGACCCT AGTTGGCCAA TTAATTGCGT TTGTCGTATT TGTAATATTC 
TGTATGAAGT ATGTATGGCC ACCAATTATT GGTGCTATAG AAGATCGTCA AGCAACTATT 
GCTGACGGAC TTGCTGCTTC AGACCGTGCT GCTAAAGATC TTGAGTTAGC TCAAGAGAAA 
GCTACAGCTC AATTAAAAGA AGCTAAAGTT CAAGCTGCGT CTATTGTTGA TGCTGCTAAA 
AAACATGAAG CTAAAATTGT TGATGAAGCT GCAGGTAAAG CACAAGTTGA GAAAGAAAGA 
ATCTTAGCTA GCGGTCATGC GGAAATTGAA ACTGAACGTA ACCGAGCTAA AGAAGAATTG 
CGCAAAGAAG TTGCAGTTCT TGCTATTGCC GGTGCCGAGA AAATTCTTGA GCGTTCAATT 
GATGCCGCTG CACATAGCGA CATCTTAGAT AAACTCGTCG CTGAACTTTA A 

 

Protein sequence

MDINMTLVGQ LIAFVVFVIF CMKYVWPPII GAIEDRQATI ADGLAASDRA AKDLELAQEK 
ATAQLKEAKV QAASIVDAAK KHEAKIVDEA AGKAQVEKER ILASGHAEIE TERNRAKEEL 
RKEVAVLAIA GAEKILERSI DAAAHSDILD KLVAEL