| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_0021 |
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| Symbol | |
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| ID | 3518927 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 25482 |
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| End bp | 26567 |
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| Gene Length | 1086 bp |
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| Protein Length | 361 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637282488 |
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| Product | LysM domain-containing protein |
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| Protein accession | YP_266803 |
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| Protein GI | 71278476 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1652] Uncharacterized protein containing LysM domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTAAAG AAATAATACT ATCACTATCT TTACTATCGT GTTCATTGGT AGCCCTTGCC
GATCAGATAA CACTTAATGA TGACGCACCT AAGACACATG TAGTAGTGAA AGGTGATACC
TTATGGGATA TTTCAGCACT GTTTCTTGAG CAACCTTGGT TATGGCCGAA GCTTTGGCGT
TTAAATCCAG AAATCAATAA TCCGCATTTA ATTTATCCCG GTGATGTTTT AAAACTTGTT
TTTGATGAAA ATGGTGAGCC TATGCTGGTG GTAGAACCGG TAAAACCAAG CTATAAATGG
TCGCCAAAAA TACGTCAAGA GAAGAAAAAA GACTCTGCAA TTACTTTGTT ACCGCTAGAA
GTTATTGCTC CTTTTGTTAG ATATGACCAT CTATTTACCG AAGATGAGCT AGAACAGCTA
CCACACATTA TAGGTAGTGA TGAAGGCTAC AGAATGACAA CGAAAGACTT TAAAGTTTAC
GTGAATAAGG ATCTCGAGGT CGCACAAAGT TATGCAATCT ATGATAAAGG TGAAGAGATT
TTTGATCCTG AAACAGATGA TTCGTTAGGT TTTTATGTCA ATTTGGTAGG AACTGGGCAA
GTAACAAAAC GTGGTGATAT AGAAAATGAT GTGCCTTCTA CTATGAGTGT TGGCTCGGTA
AAAAGAGAAA TTCATTCAGG AGACTATGTA GTACCTGTTA ATGAAGGACA ATTGTTACCC
GCTATTTTTT CTATGAAAGC AGCTAATAAA TCACTTCGTG GCTCTATTGT TAAAGCCACT
AGCAATGGTC GTGAGTTTGC CAAGCTTGAA GTTGTTATGA TTAACCGCGG CATAGATCAT
GATGTGACCG TTGGTGATGT TATGGCGATA AAACGCACCA GCCCTGCCGT GGTAGATACT
GGGAGTGGTC CTGCTTATAG TGTAGAGTCT TCACGTTGGA ATAAAATTAC GGGTAGTGAT
TATAAGATGC CAGAAGAGCA ATTAGGTGAA CTAATGATTT TTAAAGTTTA CCAAAAAGCG
AGTATGGCCC TTATTCTACA TACAGAGAAG CCAGCAAGAA TAAATGATTT GATTACCGCG
CCATAA
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| Protein sequence | MLKEIILSLS LLSCSLVALA DQITLNDDAP KTHVVVKGDT LWDISALFLE QPWLWPKLWR
LNPEINNPHL IYPGDVLKLV FDENGEPMLV VEPVKPSYKW SPKIRQEKKK DSAITLLPLE
VIAPFVRYDH LFTEDELEQL PHIIGSDEGY RMTTKDFKVY VNKDLEVAQS YAIYDKGEEI
FDPETDDSLG FYVNLVGTGQ VTKRGDIEND VPSTMSVGSV KREIHSGDYV VPVNEGQLLP
AIFSMKAANK SLRGSIVKAT SNGREFAKLE VVMINRGIDH DVTVGDVMAI KRTSPAVVDT
GSGPAYSVES SRWNKITGSD YKMPEEQLGE LMIFKVYQKA SMALILHTEK PARINDLITA
P
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