| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_0017 |
|---|
| Symbol | trkA |
|---|
| ID | 3520291 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Colwellia psychrerythraea 34H |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003910 |
|---|
| Strand | - |
|---|
| Start bp | 21059 |
|---|
| End bp | 22435 |
|---|
| Gene Length | 1377 bp |
|---|
| Protein Length | 458 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 637282484 |
|---|
| Product | potassium transporter peripheral membrane component |
|---|
| Protein accession | YP_266799 |
|---|
| Protein GI | 71279830 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0569] K+ transport systems, NAD-binding component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATAA TCATAGTGGG TGCAGGACAG GTTGGCGGTA CGTTAGCTGA AAACCTTGTT
GGTGAAAACA ATGACATTTC GGTAGTAGAC GTAGATGGTG AAAAGCTACG TGAACTGCAA
GATAAAATGG ATTTACAAGT CGTTACCGGC CAAGGGGGGC ATCCTGATGT TTTGAAAAGT
GCTGGCGCTG AAGATGCTGA TATGGTTATT GCGGTAACCA GTGATGACGC TACCAATATG
ATCACCTGCC AAATATGTTC TTCATTGTTT AATACACCGA AAAAGATTGC CCGTATTCGT
TCGAATCAAA TATTAAAGTA TTCTGAGCAA CTTTTTCATA AAAAACACAT TCCTGTTGAT
CATATTATCG CTCCCGAAGA ATTAGTAACG CGAGATATTG CGCGTCTAAT TGATTACCCT
GGCGCACTGC AAGTATTAGA GTTTGCGAAT GGAAAAGTAA GCCTAGTAGC AGTAAAAGCT
TATTACGGCG GTTTACTCGT TGGCCACGCG CTTTCAACAT TGAGAGATCA TATACCTAAT
GTCGATACGC GTGTAGCTGC CATATACCGA AACGGTAAAC CAATACGCCC TCTTGGTACC
ACAGTAATTG AAGCAGACGA TGAAGTGTTT TTTATTGCTG CGAGTATACA TATACGCGCG
GTGATGAATG AGTTACAAAA ACTCGAATCA GCTTATAAAC GTATAATGAT TGCCGGTGGC
GGTAATATTG GTGCTGGTTT AGCTCGAATT TTAGAAAAAA ATCATCAAGT AAAATTGATT
GAACGTTCAC CAAAACGTGC TGAGCAATTA ACGTCTGAGC TCAATGACAC CTTAGTTTTC
GCTGGTGACT CTTCCGATCA GGAATTACTC ACTGAAGAAA ACATTGATCA ATTTGATATT
TTTATCGCAG TAACCAATGA TGATGAAGCT AATATCATGT CGTCACTGCT TGCTAAAAAG
CTTGGCGTCC GTAAAACTAT GGTACTTATC CAACGAGATG CCTATATTGA TTTAGTACAC
GGCAGTACTA TTGATATTGC CATATCGCCA CAGCAAGCCA CTATATCAGC CCTATTAACA
CATGTTAGAC GTGGTGCTAT CGATAATGTT TATAGCTTAC GTGGCGGCGC AGCTGAAGCC
ATTGAAATTG TTGCCAAAGG TGATGAAAAA TCATCTAAAG TGGTTGGTCG TGCAATCAAA
AATATCAAAT TACCGCCTGG TGCTACTATT GGTGCTGTTG TCCGTGGTCA TGAAGTATTG
ATTGCCCACT CAAACACCTT AATTCACGAA GAAGACCACG TTATTTTATT TTTAGTTAAT
AAACGCTACA TCTCTGATAT CGAAAAGCTT TTCCAAGTGA GTGCTATTTA CTTCTAA
|
|---|
| Protein sequence | MKIIIVGAGQ VGGTLAENLV GENNDISVVD VDGEKLRELQ DKMDLQVVTG QGGHPDVLKS
AGAEDADMVI AVTSDDATNM ITCQICSSLF NTPKKIARIR SNQILKYSEQ LFHKKHIPVD
HIIAPEELVT RDIARLIDYP GALQVLEFAN GKVSLVAVKA YYGGLLVGHA LSTLRDHIPN
VDTRVAAIYR NGKPIRPLGT TVIEADDEVF FIAASIHIRA VMNELQKLES AYKRIMIAGG
GNIGAGLARI LEKNHQVKLI ERSPKRAEQL TSELNDTLVF AGDSSDQELL TEENIDQFDI
FIAVTNDDEA NIMSSLLAKK LGVRKTMVLI QRDAYIDLVH GSTIDIAISP QQATISALLT
HVRRGAIDNV YSLRGGAAEA IEIVAKGDEK SSKVVGRAIK NIKLPPGATI GAVVRGHEVL
IAHSNTLIHE EDHVILFLVN KRYISDIEKL FQVSAIYF
|
|---|
| |