Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BCE_5358 |
Symbol | opuD |
ID | 2747856 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bacillus cereus ATCC 10987 |
Kingdom | Bacteria |
Replicon accession | NC_003909 |
Strand | - |
Start bp | 4944688 |
End bp | 4946205 |
Gene Length | 1518 bp |
Protein Length | 505 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637282182 |
Product | glycine betaine transporter |
Protein accession | NP_981650 |
Protein GI | 42784403 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1292] Choline-glycine betaine transporter |
TIGRFAM ID | [TIGR00842] choline/carnitine/betaine transport |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGGAAAC TGACAAAAAC ATTCATCGTT TCATTAACAT TATGTATTGC ATTTACAATT TGGGGGATTA TTCCCGAATC TATTATTGGA AAAGGTAGCT TAGGAAATGT AACAACCGCA ATTCAAACTG CATTAGTTAG TAAGTTTGGA TGGTTTTATA TTATTTCTGT TTCTATTATT TTAGGTGTGT CTATCTTTTT AATTGTTTCA AAATACGGTT CTATTCGTTT AGGGAAAGAT GATGACGAAC CTGATTATAG TTATATGACA TGGTTTGCCA TGTTATTTAG TGCTGGTATG GGTATCGGCT TAGTGTTCTG GGGCGTTGCC GAACCATTAA ACCATTTATA CGCGCCTCCG TTTGGAGAAG GTGCAACTGA GGAAAGTGCG CGTCTTGCAC TGCGTTTTTC ATTTTTCCAT TGGGGATTAC ATCCGTGGGG ACTATATGCA TTTGTAGCGC TTTGTATTGC TTACTTTACT TTTAGAAAAG GAAAAGCAAG TACAATTAGT GCGACAGTAG GACCGTTATT TAAGGGCGGG GACCATGGGC GCATTGCTCA TTTATTTGAT GTGTTAGCTG TTTTCGCCAC TGTGTTTGGC GTGGCAACAT CATTAGGTCT TGGCGCAAAA CAAATTGCCG GTGGTGTTAG TTATTTAACT TCTATCCCGA ACTCATTAAC GACTCAGTTA GTTATTATTG CAATCGTAAC AGTATTATTT ATGTTATCTG CGCAAACAGG TCTTGATAAA GGAATTAAAT ATTTAAGTAA TACAAACATT ATTTTTGCGT TTGCACTTAT GATTATTGTA TTGTTTGCAG GTCCAACAAA CTTTATTATG AATTACTTCA CTTCGACAAT CGGTTCTTAT ATTCAGGAAT TGCCAAGTAT GAGTTTCCGA TTAAGTCCAT TAGATGAAGG CGGAAACCAA TGGATTCAAT CATGGACAAT TTTCTATTGG GCATGGTGGA TTGCATGGTC ACCATTCGTA GGTACATTTA TTGCCCGTGT TTCACGAGGG CGTACCATTC GTGAATTTGT TATCGGTGTG TTACTCGTAC CGACAATAAT TGGTGCTCTT TGGTTCTCAG TTTTCGGCGG GACTGGTATT CATATGGAAC TGTTTGGTGA TGCACATATC TTTGAAAAAA TTAAAGAGAT GGGAACAGAA GTAGGACTAT TCGCTATGTT TGATCAGATG GGAAGCTTTG GATCAGCGTT ATCTGTTCTA GCTATTCTTC TTATTTCTAC ATTCTTTATT ACATCTGCAG ATTCAGCGAC ATTTGTTTTA GGGATGTTAA CGACACATGG TAGTTTAAAT CCACCAAACC GCATTAAAAT GATCTGGGGT ATCGTTTTAG CTGCTCTAGC TTCTATCTTA TTATATGTAG GTGGATTAGA AGCCTTACAA ACGGCAGCTA TCATTGCAGC ATTCCCATTC GTCTTCGTTA TTTTCTTTAT GATGGCAGCA TTATTTAAAG AGTTACAAAA AGAAGGTCGT ATGAAGCGTC ATAAATAA
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Protein sequence | MRKLTKTFIV SLTLCIAFTI WGIIPESIIG KGSLGNVTTA IQTALVSKFG WFYIISVSII LGVSIFLIVS KYGSIRLGKD DDEPDYSYMT WFAMLFSAGM GIGLVFWGVA EPLNHLYAPP FGEGATEESA RLALRFSFFH WGLHPWGLYA FVALCIAYFT FRKGKASTIS ATVGPLFKGG DHGRIAHLFD VLAVFATVFG VATSLGLGAK QIAGGVSYLT SIPNSLTTQL VIIAIVTVLF MLSAQTGLDK GIKYLSNTNI IFAFALMIIV LFAGPTNFIM NYFTSTIGSY IQELPSMSFR LSPLDEGGNQ WIQSWTIFYW AWWIAWSPFV GTFIARVSRG RTIREFVIGV LLVPTIIGAL WFSVFGGTGI HMELFGDAHI FEKIKEMGTE VGLFAMFDQM GSFGSALSVL AILLISTFFI TSADSATFVL GMLTTHGSLN PPNRIKMIWG IVLAALASIL LYVGGLEALQ TAAIIAAFPF VFVIFFMMAA LFKELQKEGR MKRHK
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