Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BCE_5074 |
Symbol | dapF |
ID | 2749822 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bacillus cereus ATCC 10987 |
Kingdom | Bacteria |
Replicon accession | NC_003909 |
Strand | - |
Start bp | 4690861 |
End bp | 4691727 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637281898 |
Product | diaminopimelate epimerase |
Protein accession | NP_981367 |
Protein GI | 42784120 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0253] Diaminopimelate epimerase |
TIGRFAM ID | [TIGR00652] diaminopimelate epimerase |
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Plasmid Coverage information |
Num covering plasmid clones | 45 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCCAAT TTTCTTTTAC AAAAATGCAT GGTCTTGGCA ATAGTTATAT ATATGTAAAT ATGTTTGAAG AACAAATTCC TGAAGAAGAT TTAGCTCTTG TGGCGGAAAA GGTTTCAAAT ATTAATACTG GTATTGGAGC AGATGGAATG ATTTTAATTT GTCCATCTGA CGTAGCGCCG GTGAAAATGC GCATGTTTAA TAATGATGGA TCAGAAGGAA AGAGCTGTGG TAACGGTTTA CGCTGCGTAG CGAAATATGC GTATGAGCAT AAACTAGTAG AAGATACAGT TTTCACAATT GAAACGTTAG CTGGCATTGT AACGGCGGAA GTAACGGTAG AAGAAGGGAA AGTTACATTA GCGAAAATCG ATATGGGAGC ACCTCGTTTA ACACGTGCAG AAATACCGAT GCTTGGTGAA GGTGAAACAC CATTTATTCG TGAAAACTTC TTATACAATA ATCATCGTTA TGCATTTACA GCTGTTTCAA TGGGAAATCC GCATGCAGTT ATTTTTGTTG ATGATGTAGA CCAAGCACCT CTTACAACGC TTGGTCCAGT CCTTGAGACA CATGAAATGT TCCCGGAACG AGTAAATGTT GAATTCATCG AAATCTTAAA TGAGGAAGAG ATGAACTTCC GCGTTTGGGA ACGTGGATCT GGTGTAACAC AAGCTTGCGG AACAGGGGCG TGTGCTGCAG TTGTAGCCTC TATTTTAAAT GGAAAAATGG AACGTGGTAA GGAAATTACA GTTCATTTAG CTGGCGGCGA TTTAATGATT GCATGGACAG AAGAAGGCAA TGTGTTAATG AAAGGACCAG CGGAAGTAAT TTGCCGCGGA GTGTATGAGT ACAAGATAGA AGCGTAA
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Protein sequence | MSQFSFTKMH GLGNSYIYVN MFEEQIPEED LALVAEKVSN INTGIGADGM ILICPSDVAP VKMRMFNNDG SEGKSCGNGL RCVAKYAYEH KLVEDTVFTI ETLAGIVTAE VTVEEGKVTL AKIDMGAPRL TRAEIPMLGE GETPFIRENF LYNNHRYAFT AVSMGNPHAV IFVDDVDQAP LTTLGPVLET HEMFPERVNV EFIEILNEEE MNFRVWERGS GVTQACGTGA CAAVVASILN GKMERGKEIT VHLAGGDLMI AWTEEGNVLM KGPAEVICRG VYEYKIEA
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