| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BCE_5015 |
|---|
| Symbol | menD |
|---|
| ID | 2751959 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus cereus ATCC 10987 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003909 |
|---|
| Strand | - |
|---|
| Start bp | 4625021 |
|---|
| End bp | 4626775 |
|---|
| Gene Length | 1755 bp |
|---|
| Protein Length | 584 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 637281814 |
|---|
| Product | 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase |
|---|
| Protein accession | NP_981308 |
|---|
| Protein GI | 42784061 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1165] 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase |
|---|
| TIGRFAM ID | [TIGR00173] 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.44907 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACAATC ATATAGAAGC ATTATCATAT TATTTAGGCG CGTTCGTGGA TGAACTGACG
CGTCTAAATG TATGTGATGT TGTCATTAGT CCAGGCTCAC GGTCAACGCC GATTGCTCTA
CTAATGGAAC AACATGAAGG AATGAACACA TATTTACATG TAGATGAAAG ATCAGCAGGA
TTTTTTGCGC TCGGTATCGC AAAAGCGAAA AAACGTCCTG TTGCATTATT ATGTACGTCA
GGAACGGCTG CAGCGAACTA TTATCCAGCT GTATGTGAAG CTTTTCATTC GCGAGTGCCG
CTTATCGTCT TAACGGCAGA TAGACCGCAT GAATTAAGAG ATGTCGGTGC ACCACAAGCG
ATGAATCAAA TTAATTTATA CGGCACGTTT GTGAAGCAAT TTACAGAGAT GGCAATTCCA
GAAGCGAATG AGGCGATGTA TCATTACGCT CGCATGACAA CGCAGCGCAT GATAGCGAGC
GCGCTTTTAG CACCGCAAGG ACCTGTTCAT CTTAATTTTC CAGTTCGTGA ACCGCTTATC
CCGGACTTCT CATTAGAAAG TTTATGGGAT AAAGGACGCG GAGAATATAC AGGAGTAGTT
CAGCGAGGGA ATGCGGTGAT GCCGAGTGAA TATGTAGATT CTCTTGTAGG GCGCCTTTCA
CATATGGAAA AGGGGCTTAT TATTTGTGGA GATGATAGTC ATTCAGAAAT CGCAACGTTT
GCAACGCAAC TAGCTGAAAA AACGGGATAT CCAATATTAG CGGATCCACT TTCTAACATT
CGTAGTGGAC ACCACGATAA AACGATGGTA ATCGACTGTT ACGATACATT TTTACGAAAT
GTGCTGTTAA AAGAAACGTG GAAGCCAGAA GTTATAATTC GCTTCGGTGG TATGCCTGTT
TCGAAAGCAT TAACGCAGTT CATCAAAAAA CAAACGAAAG CTGTTCATAT CGTTGTTGAC
GAATCAGGAC AATGGAGAGA TCCAGCTCTC GTTGCAACAG AAGTTGTCCA AGCAAGTGAT
ATTGCATTTT GCAGTGCACT AATAGAAAAA ATGCCAGTTA TGAAAAAGAA TGATTGGTCC
CAAATGTGGC AACATATAAA CGAAAAAACG AAGGAAACGC TTCGTGAAAT GGAAACATAT
GATACTGCGT TTGAAGGAAG AGTCATTACG GATATTGTCC GCGTATTACC AGAAGGAGCA
ACGTTATTTG CGAGTAATAG TATGCCAATT CGTGATACAG ATTCATTCTT TTTCACATCG
GATAAAAATA TTCAAGTGAT GGCTAACCGC GGTGTAAATG GGATTGATGG AATCATTTCG
ACAGCTTTAG GAGCGAGCAT GATTTGCGAT CCGCTCGTAT TAGTAATCGG TGATTTATCA
TTTTATCATG ATTTAAACGG ATTATTAGCC GCAAAATTAC ATGAGTTAAA TATAACGATT
GTTGTTGTAA ATAATGACGG TGGTGGTATT TTCTCATTCT TACCACAATA TGAGAAAAAG
GAACATTTCG AATCATTATT TGGAACTCCA ATTGGGCTTG ACTATGAGCA TGTTGTCAAC
ATGTACGGTG GTTCATTTAG CCGTGTAAAT GGTTGGGAGC AATTCCGTGA AGAGGTACAA
AAAGGAACGA CGACAGAAGG TTTACACGTT GTGGAAATTT GTACGAACCG TGATGAAAAC
TTAACGTTGC ACCGTACGTT ATGGGCAAAA ACACAGGACG TCATTACTAC ATCGTTGCAA
GGTGAATCAA AATGA
|
|---|
| Protein sequence | MNNHIEALSY YLGAFVDELT RLNVCDVVIS PGSRSTPIAL LMEQHEGMNT YLHVDERSAG
FFALGIAKAK KRPVALLCTS GTAAANYYPA VCEAFHSRVP LIVLTADRPH ELRDVGAPQA
MNQINLYGTF VKQFTEMAIP EANEAMYHYA RMTTQRMIAS ALLAPQGPVH LNFPVREPLI
PDFSLESLWD KGRGEYTGVV QRGNAVMPSE YVDSLVGRLS HMEKGLIICG DDSHSEIATF
ATQLAEKTGY PILADPLSNI RSGHHDKTMV IDCYDTFLRN VLLKETWKPE VIIRFGGMPV
SKALTQFIKK QTKAVHIVVD ESGQWRDPAL VATEVVQASD IAFCSALIEK MPVMKKNDWS
QMWQHINEKT KETLREMETY DTAFEGRVIT DIVRVLPEGA TLFASNSMPI RDTDSFFFTS
DKNIQVMANR GVNGIDGIIS TALGASMICD PLVLVIGDLS FYHDLNGLLA AKLHELNITI
VVVNNDGGGI FSFLPQYEKK EHFESLFGTP IGLDYEHVVN MYGGSFSRVN GWEQFREEVQ
KGTTTEGLHV VEICTNRDEN LTLHRTLWAK TQDVITTSLQ GESK
|
|---|
| |