Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BCE_4194 |
Symbol | cpdB |
ID | 2748267 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bacillus cereus ATCC 10987 |
Kingdom | Bacteria |
Replicon accession | NC_003909 |
Strand | - |
Start bp | 3910553 |
End bp | 3912874 |
Gene Length | 2322 bp |
Protein Length | 773 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 637280991 |
Product | bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein |
Protein accession | NP_980487 |
Protein GI | 42783240 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0737] 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases |
TIGRFAM ID | [TIGR01167] LPXTG-motif cell wall anchor domain [TIGR01390] 2',3'-cyclic-nucleotide 2'-phosphodiesterase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCTAGCTG GAGCAACTCT TGCTATTGGT GTTATAGCGC CGCAAGTATT GCCAGCAACA GCTCATGCGG ATGAGCAAAC TGGGGAGAGT ACGGTTAACT TACGAATTCT AGAAACATCA GATATTCACG TTAACTTAAT GAATTACGAT TATTATCAAA CGAAAACCGA TAATAAAGTA GGTCTCGTAC AAACTGCAAC ACTTGTGAAT AAAGCGCGTG AAGAAGCGAA GAATTCTGTC CTATTTGATG ATGGAGATGC ATTACAAGGG ACACCGCTTG GAGATTATGT AGCGAATAAA ATAAATGATC CGAAGAAGCC TGTGGATCCT AGTTATACGC ACCCATTATA TCGTTTAATG AATTTAATGA AGTATGACGT CATCTCTCTT GGGAATCATG AATTTAACTA CGGTTTAGAT TATTTAAACA AAGTAATTAG TAAAACAGAA TTCCCGGTTA TTAACTCGAA CGTCTATAAA GATGATAAAG ATAATAATGA AGAGAATGAT CAAAATTACT TTAAACCATA TCATGTTTTT GAAAAAGAAG TAGAAGATGA ATCAGGTCAA AAACAAAAAG TGAAAATTGG CGTAATGGGA TTTGTTCCAC CTCAAGTTAT GAACTGGGAT AAAGCAAATC TAGAAGGAAA AGTGAAAGCA AAAGATATAG TTGAAACAGC GAAAAAAATG GTGCCAAAAA TGAAAGCAGA AGGTGCTGAT GTTATCGTTG CACTAGCGCA TTCAGGTGTT GATAAGAGTG GATACAACGT TGGCATGGAA AACGCATCGT ATTATTTAAC AGAAGTTCCT GGTGTAGATG CAGTATTAAT GGGACATTCA CATACGGAAG TGAAGGACGT ATTTAATGGT GTTCCAGTTG TAATGCCTGG TGTCTTTGGA AGTAACTTAG GTATTATTGA TATGCAATTG AAAAAAGTAA ATGGAAAATG GGAAGTACAA AAAGAGCAAT CGAAGCCGCA ACTTCGTCCG ATTGCTGATA GTAAAGGAAA CCCACTCGTA CAATCTGATC AACATTTAGT TAATGAAATT AAAGATGATC ATCAAGCGAC AATTGATTAT GTGAATACTG CTGTAGGAAA AACGACAGCG CCAATTAATA GTTATTTCTC ATTAGTACAG GATGATCCTT CTGTACAACT TGTGACAAAT GCACAAAAAT GGTATGTAGA AGAGGAATTT AAAAAACCAG AGTACGAAAA ATATAAAGGA ATTCCAGTTT TATCTGCGGG TGCACCATTT AAAGCAGGTG GCCGAAACGG TGCTACATAT TATACGGACA TTCCAGCTGG AACGTTAGCG ATTAAAAACG TGGCAGATTT ATATGTATAT CCAAATACGT TATATGCTGT AAAAGTAAAT GGGGCACAAG TGAAAGAATG GCTTGAAATG TCTGCAGGTC AGTTTAATCA AATTGATCCA AAGAAAACAG AAGAACAGCC GTTAGTAAAT ATAGGTTATC CTACATATAA CTTCGATATT TTAGATGGCT TAAAATACGA AATTGATGTA ACACAACCGG CGAAATACGA TAAAGATGGA AAAGTTGTAA ATGCAAATAC GAACCGTATT GTAAATATGA CATATGAAGG GAAGCCAGTA GCTGACAATC AAGAATTCAT CGTCGCTACA AATAACTATC GCGGAAGCAG CCAAACGTTC CCGGGTGTAA GCAAAGGGGA GGTTGTATAC CAATCACAAG ATGAAACGCG TCAAATCATT GTGAAGTATA TGCAAGAAAC GCCAGTTATT GATCCAGCAG CAGATAAAAA TTGGACGTTT AAACCGATTG TTGCCGATAA ATTACATACA ACATTCGATT CTTCACCAAA TGCACAAAAG TATATAAAGA AAGATGGAAA AATATCATAT GTTGGACCAT CTGAAAATGA ATTTGCTAAA TATGCAATTG ATATAACGAA GAAGAACGAT GATGATAAAG AAACTGGTGG AGAGAATCCA ACAACACCGC CAACAGGTGA AGGAAATAAT GGAGAAAATC CAACGACACC ACCAACAAGT GAAGGAAATA ATGGAGAAAA TCCAACAACA CCACCAACAG GTGAAGGAAA TAATGGAGAA AATCCAACGA CACCACCAAC AGATGAAGGT AATAATACAG GATCTGGACA AACTACAACG GATAATCAAA ACGCAAAAGA AACAACAACT GTAAGTGAAA AGAAAGAAGA ACGTGATTTA CCGAAAACAG GTACAAGTGT TGTTTCTACA ATTGGAGCAG GTTTGGCGTT TGTTGGAGCA GGATTCCTTC TGTTATTTAG AAGAAAGAAA GCAAATAGAT AG
|
Protein sequence | MLAGATLAIG VIAPQVLPAT AHADEQTGES TVNLRILETS DIHVNLMNYD YYQTKTDNKV GLVQTATLVN KAREEAKNSV LFDDGDALQG TPLGDYVANK INDPKKPVDP SYTHPLYRLM NLMKYDVISL GNHEFNYGLD YLNKVISKTE FPVINSNVYK DDKDNNEEND QNYFKPYHVF EKEVEDESGQ KQKVKIGVMG FVPPQVMNWD KANLEGKVKA KDIVETAKKM VPKMKAEGAD VIVALAHSGV DKSGYNVGME NASYYLTEVP GVDAVLMGHS HTEVKDVFNG VPVVMPGVFG SNLGIIDMQL KKVNGKWEVQ KEQSKPQLRP IADSKGNPLV QSDQHLVNEI KDDHQATIDY VNTAVGKTTA PINSYFSLVQ DDPSVQLVTN AQKWYVEEEF KKPEYEKYKG IPVLSAGAPF KAGGRNGATY YTDIPAGTLA IKNVADLYVY PNTLYAVKVN GAQVKEWLEM SAGQFNQIDP KKTEEQPLVN IGYPTYNFDI LDGLKYEIDV TQPAKYDKDG KVVNANTNRI VNMTYEGKPV ADNQEFIVAT NNYRGSSQTF PGVSKGEVVY QSQDETRQII VKYMQETPVI DPAADKNWTF KPIVADKLHT TFDSSPNAQK YIKKDGKISY VGPSENEFAK YAIDITKKND DDKETGGENP TTPPTGEGNN GENPTTPPTS EGNNGENPTT PPTGEGNNGE NPTTPPTDEG NNTGSGQTTT DNQNAKETTT VSEKKEERDL PKTGTSVVST IGAGLAFVGA GFLLLFRRKK ANR
|
| |