Gene BCE_1338 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBCE_1338 
SymbolrfbD 
ID2752207 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBacillus cereus ATCC 10987 
KingdomBacteria 
Replicon accessionNC_003909 
Strand
Start bp1346376 
End bp1347230 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content36% 
IMG OID637278162 
ProductdTDP-4-dehydrorhamnose reductase 
Protein accessionNP_977659 
Protein GI42780412 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1091] dTDP-4-dehydrorhamnose reductase 
TIGRFAM ID[TIGR01214] dTDP-4-dehydrorhamnose reductase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.326275 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAGAAC GGATTATCAT AACAGGAGCA AATGGTCAAT TGGGAAAGCA ACTACAAGAA 
GAGTTAAATC CTGAAGAATA TGACATATAT CCATTTGATA AAAAGTTACT AGATATAACA
AATATATCCA AAGTGCAGCA AGTAGTACAA GAAATAAGGC CACATATCAT TATTCATTGT
GCAGCGTATA CGAAGGTTGA TCAAGCTGAG AAAGAACGAG ATCTTGCTTA TAGAATAAAT
GCAATAGGGG CTCGAAATGT AGCAGTTGCC TCACAATTAG TGGGGGCGAA GTTAGTTTAT
ATTAGTACGG ATTATGTATT TCAAGGTGAT AGACCGGAAG GGTACGATGA ATTTCATAAT
CCGGCGCCGA TAAATATATA CGGGGCTTCT AAATATGCGG GAGAGCAGTT CGTCAAAGAG
TTACATAATA AATACTTTAT CGTTCGTACG TCATGGTTGT ATGGTAAGTA TGGAAATAAT
TTTGTGAAAA CGATGATGCG ATTAGGGAAA GAAAGAGAAG AAGTATCTGT TGTAGCGGAT
CAAATCGGTT CTCCTACGTA TGTGGCGGAT TTAAATGTAA TGATTAATAA GCTCATTCAT
ACTTCTTTAT ACGGTACGTA TCACATATCC AATAGAGGAT CATGTTCTTG GTTTGAATTT
GCAAAGAAAA TATTTTCGTA TGCAAATATG AAAGTGGATG TATTACCGGT TTCAACTGAA
GAATTTGGAG CGGCGGCAGC GAGACCAAAA TATTCTATTT TCCAACATAA CATGCTACGA
TTAAATGGTT TTTTACAAAT GCCTTCTTGG GAAGAAGGAT TAGAGCGTTT TTTTATAGAA
ACAAAAAGTC ATTAA
 
Protein sequence
MRERIIITGA NGQLGKQLQE ELNPEEYDIY PFDKKLLDIT NISKVQQVVQ EIRPHIIIHC 
AAYTKVDQAE KERDLAYRIN AIGARNVAVA SQLVGAKLVY ISTDYVFQGD RPEGYDEFHN
PAPINIYGAS KYAGEQFVKE LHNKYFIVRT SWLYGKYGNN FVKTMMRLGK EREEVSVVAD
QIGSPTYVAD LNVMINKLIH TSLYGTYHIS NRGSCSWFEF AKKIFSYANM KVDVLPVSTE
EFGAAAARPK YSIFQHNMLR LNGFLQMPSW EEGLERFFIE TKSH