Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BCE_1256 |
Symbol | rocD |
ID | 2752689 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bacillus cereus ATCC 10987 |
Kingdom | Bacteria |
Replicon accession | NC_003909 |
Strand | - |
Start bp | 1262800 |
End bp | 1263990 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637278080 |
Product | ornithine--oxo-acid transaminase |
Protein accession | NP_977577 |
Protein GI | 42780330 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4992] Ornithine/acetylornithine aminotransferase |
TIGRFAM ID | [TIGR01885] ornithine aminotransferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATTCAAA CTAAGGATAT TATCGAACTT ACAGACACAT ACGGGGCAAA TAACTATCAC CCACTTCCAA TCGTTATTTC TAAAGCAGAA GGCGTTTGGG TAGAAGATCC TGAAGGAAAC CGCTATATGG ACTTATTAAG TGCATATTCT GCAGTAAACC AAGGTCATCG TCACCCAAAA ATTATTAACG CTTTAATTGA CCAAGCTAAT CGTGTTACGT TAACTTCTCG TGCTTTCCAT AGCGATCAAT TAGGTCCTTG GTACGAAAAA GTTGCGAAAC TAACTAATAA AGAAATGGTA CTTCCAATGA ATACAGGTGC AGAAGCTGTT GAAACTGCAA TTAAAACGGC TCGCCGATGG GCTTATGATG TGAAGAAAGT AGAAGCAAAC CGTGCTGAAA TTATCGTTTG TGAAGATAAC TTCCACGGAC GTACGATGGG TGCTGTTTCT ATGTCTTCAA ACGAAGAGTA CAAGCGTGGA TTCGGTCCAA TGCTTCCTGG CATCGTTGTA ATTCCTTACG GTGATTTAGA AGCGTTAAAA GCTGCTATTA CACCAAACAC AGCTGCATTC ATTTTAGAGC CAATCCAAGG TGAAGCAGGA ATTAACATCC CACCAGCTGG TTTCTTAAAA GAAGCTCTTG AAGTATGTAA AAAAGAAAAC GTTTTATTCG TAGCAGATGA AATCCAAACT GGCTTAGGTC GTACTGGTAA AGTATTTGCT TGTGACTGGG ACGGTGTAAC TCCTGACATG TACATACTTG GTAAAGCACT TGGCGGCGGC GTATTCCCAA TCTCTTGCGT TGCAGCAAAC CGCGACATTT TAGGTGTATT TGAGCCAGGT TCTCACGGTT CTACATTCGG TGGTAATCCA CTTGCATGTG CTGTTTCTAT CGCAGCTCTT GAAGTGTTAG AAGAAGAAAA ATTAACAGAG CGTTCTCTTC AATTAGGTGA AAAATTAGTT GGACAATTAA AAGAAATTGA TAACCCAATG ATTACTGAAG TTCGCGGTAA AGGTTTATTT ATCGGTATCG AATTAAACGA GCCAGCTCGT CCTTACTGTG AACAACTAAA AGCAGCTGGA CTGTTATGTA AAGAAACACA CGAAAACGTA ATTCGTATCG CACCACCTCT AGTAATCTCT GAAGAAGATT TAGAGTGGGC ATTCCAAAAA ATTAAAGCTG TATTATCGTA A
|
Protein sequence | MIQTKDIIEL TDTYGANNYH PLPIVISKAE GVWVEDPEGN RYMDLLSAYS AVNQGHRHPK IINALIDQAN RVTLTSRAFH SDQLGPWYEK VAKLTNKEMV LPMNTGAEAV ETAIKTARRW AYDVKKVEAN RAEIIVCEDN FHGRTMGAVS MSSNEEYKRG FGPMLPGIVV IPYGDLEALK AAITPNTAAF ILEPIQGEAG INIPPAGFLK EALEVCKKEN VLFVADEIQT GLGRTGKVFA CDWDGVTPDM YILGKALGGG VFPISCVAAN RDILGVFEPG SHGSTFGGNP LACAVSIAAL EVLEEEKLTE RSLQLGEKLV GQLKEIDNPM ITEVRGKGLF IGIELNEPAR PYCEQLKAAG LLCKETHENV IRIAPPLVIS EEDLEWAFQK IKAVLS
|
| |