| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BCE_0541 |
|---|
| Symbol | |
|---|
| ID | 2749395 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus cereus ATCC 10987 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003909 |
|---|
| Strand | + |
|---|
| Start bp | 553546 |
|---|
| End bp | 554409 |
|---|
| Gene Length | 864 bp |
|---|
| Protein Length | 287 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 637277329 |
|---|
| Product | HhH-GPD superfamily base excision DNA repair protein |
|---|
| Protein accession | NP_976868 |
|---|
| Protein GI | 42779621 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0122] 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.256846 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTGGAGCG AACATGTTAC GTTAGAGTAT CCGTATCATT TTGAAGAAGT ATTAAAACGT
TTATCTTTTG ATCCTCTTAA CGTCATTCAA TTAGATGAGA AAGTTATTTA TGTCCCGCTT
TGTATAGACG AGGAACAGAT TGTTGTTCGT CTGCAAGGGA TTGGTACTGT TCAAAATCCA
CAGTTTTGGA TTTCTAGTCA GACAGGAGAT TCAGAGAAAG TCATGAAACG AATGAGGGCC
ATTTTTCATT GGAATGAACC GTTTCAAGAT ATACAAAATC ATTTTTTAAA CACATCATTA
CGTCCACTAT TTGAAACATA TGCTTATACT CCAATTATTT TAGAATTTGA TTATTTTGCT
TGTCTTCTTC GCTGTATCAT TCATCAACAA ATAAATTTGA AATTTGCTAC TGTGTTAACA
GAACAGTTTG TGAAACGATA TGGAACAGAG AAGAACGGTG TATTCTTTTT CCCCACTCCA
GAAATAGTAG CAAATATTTC AATAGAGGAA TTGAGAGAGC AGAAGTTTAG TCAGCGAAAA
GCTGAATATA TGGTAGGATT AGCAAAGTGT ATTATAGGTG GTAAGTTAGA TTTAACTAGA
ATAGAAAACG AAACAGAAGA AGGAGTTGCA GCACAATTGT TACCAATTAG GGGGATTGGT
GCATGGACAG TGCAAAACTT TTTAATGTTT GGGCTTGGAC GGAAAAATAT GTTTCCGAAA
GCAGACATTG GGATTCAGCG TGCAGTACAA GGTGTATTTC AATTAGATGA TAAACCTGAT
GATGCATTTT TAGAAAACGT GAAACAAGAG TGTGAACCAT ACTGCAGTTA TGCAGCGTTA
TATTTATGGA AAAGTATAGA GTAG
|
|---|
| Protein sequence | MWSEHVTLEY PYHFEEVLKR LSFDPLNVIQ LDEKVIYVPL CIDEEQIVVR LQGIGTVQNP
QFWISSQTGD SEKVMKRMRA IFHWNEPFQD IQNHFLNTSL RPLFETYAYT PIILEFDYFA
CLLRCIIHQQ INLKFATVLT EQFVKRYGTE KNGVFFFPTP EIVANISIEE LREQKFSQRK
AEYMVGLAKC IIGGKLDLTR IENETEEGVA AQLLPIRGIG AWTVQNFLMF GLGRKNMFPK
ADIGIQRAVQ GVFQLDDKPD DAFLENVKQE CEPYCSYAAL YLWKSIE
|
|---|
| |