Gene BCE_0335 details

Gene Information

• Locus tag: BCE_0335
• Symbol: ligA
• ID: 2751513
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Bacillus cereus ATCC 10987
• Kingdom: Bacteria
• Replicon accession: NC_003909
• Strand: +
• Start bp: 354410
• End bp: 356419
• Gene Length: 2010 bp
• Protein Length: 669 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 637277124
• Product: NAD-dependent DNA ligase LigA
• Protein accession: NP_976663
• Protein GI: 42779416
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II)
• TIGRFAM ID: [TIGR00575] DNA ligase, NAD-dependent

Plasmid Coverage information

• Num covering plasmid clones: 30
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCAAAAG AGATAGCAAA AAAACGTATA GAAGAACTAC GTGATTTGTT AAATACATTT 
AACTATCAAT ATCACGTGTT AGACAATCCT TCTGTTTCTG ATGCGGAGTA TGACCGTAAT 
ATGCAGGAGC TTATAAAATT AGAAGCAGAG AACCCAGAGT TTATGAGTGA AGATTCTCCC 
TCCGTTCGCG TTGGGGGAAC GGTTCTTGAT ATATTTGAAA AAGTAACACA CAAGTCACCG 
ATGTTAAGTT TAGGAAATGC ATTTAACGAA GGAGATTTAC GTGATTTTGA CCGACGAGTA 
CGTCAAGGAA TTGATGATGT GAATGTAAGA TATATATGCG AATTAAAAAT TGACGGACTT 
GCTGTTTCAC TTCATTATGA AAAAGGACGC TTCATTCAAG GGGCAACACG TGGTGATGGT 
GTAACAGGTG AAGATATTAC TCAAAATTTA AAAACGATTA AAGCAATCCC GCTTCGTTTA 
AATGAAGAAG TAACGTTAGA AGCACGAGGC GAAGCTTATA TGCCGAAGCG TTCATTCGTT 
AAGTTAAATG AAGAAAAAGA GCAAAATGGT GAAGATGTAT TTGCAAATCC GCGTAATGCG 
GCAGCAGGTT CAATCCGCCA ACTTGATCCG AAAATTGCAG CGAAGCGTAA CTTATCTATG 
TTTGTATACG GTCTTGCGAA TGTAGAAGAA AAAACAATCC TATCACATAG TGAATCGCTT 
GATTTCTTAG GTGAACTTGG ATTCAAAACA AATCCAAATC GACGCACATG TGAAACAATT 
GAAGAAGTTA TAGCTTATGT AGAAGAATGG CAAGAAAAAC GTCCGCATCT TGATTATGAG 
ATTGATGGGA TCGTTATAAA AGTAGATGAT GTTGCTCTTC AAGAAAGTCT AGGCACTACA 
GCAAAGAGTC CAAGATGGGC AATTGCTTAT AAATTCCCAG CTGAAGAAGT TGTAACAAGA 
TTAACAGGGA TTGAATTAAG TGTTGGTCGT ACAGGGGTTG TAACACCGAC TGCAGAGCTA 
GAGCCAGTGC GAGTGGCTGG TACGATCGTT CGTCGTGCTT CTTTACATAA CGAAGATTTA 
ATTCGTGAAA AAGATATTCG AATTGGTGAC TACGTTGTTG TGAAGAAGGC TGGAGATATT 
ATTCCTGAAG TTGTGAATGT TATTTTCGAT AAGCGTACTG GTGAGGAAGA AGAATATCAT 
ATGCCAACGC ATTGCCCAGC ATGTGAGAGT GAACTAGTTC GTTTAGAAGA AGAGGTAGCA 
CTTCGTTGTA TAAATCCAAC TTGTCCTGCT CAAATTCGAG AAGGGTTAAT CCATTTCGTT 
TCAAGAAATG CAATGAATAT TGATGGACTT GGAGAACGTG TCATTACACA ACTCTTTGAG 
GCAGATTATA TTCGTACATT TGCTGATTTA TATTCGTTGA CGAAAGAGCA ATTATTACAG 
CTAGAACGAT TTGGAGAAAA ATCAGCAACG AATTTAGTAA AAGCAATTGA GAATTCTAAA 
GAAAACTCAT TAGAGCGATT ATTATTCGGT CTAGGTATTC GCCATGTCGG AGCGAAAGCA 
GCACGTACAT TTGCAGAGCA TTTCGAAACG ATGGATGCGC TTGTGAAGGC AACGGAAGAA 
GAACTAAAAG CAATTAATGA AATTGGTGAA AAAATGGCTC AATCCGTAGT AACGTATTTC 
GATAATGAAG ACGTATTAGA GTTATTACAA CAATTTAAAG AATACGGCGT GAACATGACA 
TATAAAGGCA TGAAAATTGC TGATTTACAA AACGTTGAGT CGTACTTCGC AGGAAAAACT 
GTCGTTTTAA CAGGGAAATT AGAAGTTATG GGACGTAGTG AAGCGAAGAA GAAAATTGAG 
GCATTAGGTG GAAAAGTAAC AGGAAGTGTT AGTAAAAGTA CGGATTTAGT TGTTGCAGGT 
GAAGCGGCAG GTTCGAAATT AGCACAAGCG GAGAAACATA ATGTTGAGGT TTGGAATGAA 
GAGAGGTTCT TACAAGAGCT AAATAAGTAA 

 

Protein sequence

MSKEIAKKRI EELRDLLNTF NYQYHVLDNP SVSDAEYDRN MQELIKLEAE NPEFMSEDSP 
SVRVGGTVLD IFEKVTHKSP MLSLGNAFNE GDLRDFDRRV RQGIDDVNVR YICELKIDGL 
AVSLHYEKGR FIQGATRGDG VTGEDITQNL KTIKAIPLRL NEEVTLEARG EAYMPKRSFV 
KLNEEKEQNG EDVFANPRNA AAGSIRQLDP KIAAKRNLSM FVYGLANVEE KTILSHSESL 
DFLGELGFKT NPNRRTCETI EEVIAYVEEW QEKRPHLDYE IDGIVIKVDD VALQESLGTT 
AKSPRWAIAY KFPAEEVVTR LTGIELSVGR TGVVTPTAEL EPVRVAGTIV RRASLHNEDL 
IREKDIRIGD YVVVKKAGDI IPEVVNVIFD KRTGEEEEYH MPTHCPACES ELVRLEEEVA 
LRCINPTCPA QIREGLIHFV SRNAMNIDGL GERVITQLFE ADYIRTFADL YSLTKEQLLQ 
LERFGEKSAT NLVKAIENSK ENSLERLLFG LGIRHVGAKA ARTFAEHFET MDALVKATEE 
ELKAINEIGE KMAQSVVTYF DNEDVLELLQ QFKEYGVNMT YKGMKIADLQ NVESYFAGKT 
VVLTGKLEVM GRSEAKKKIE ALGGKVTGSV SKSTDLVVAG EAAGSKLAQA EKHNVEVWNE 
ERFLQELNK