Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSp1615 |
Symbol | uxaA |
ID | 1223927 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | - |
Start bp | 2031720 |
End bp | 2033279 |
Gene Length | 1560 bp |
Protein Length | 519 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637241478 |
Product | putative altronate hydrolase (ALTRONIC acid hydratase) protein |
Protein accession | NP_523174 |
Protein GI | 17549834 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2721] Altronate dehydratase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.135092 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0340906 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCAGG CAACCCAGGC CGATCGCGTG ACCGACAACG GCCCGCTGAT CCGGCTGAAC CCGGCCGACA ACGTGCTGAT CGCCCGCGCG GCACTGTCGC TCGGGCAGCC GCTGTCGCTG GGCGGCGCGA CGGTGCGGCT GCGCGCCCAG GTGCCGGCCG GCCACAAGAT CGCCGCCTGC CGCATCGCGC GCGGCGAGGC GATCCGCAAG TACGACACCG TCATCGGCCG CGCCGCGCGC GACATCGAGC CGGGCGAGCA CGTGCACACG CACAACGTCG AGCTGATCGA TTTCGAGCGC GACCCCGGCT TCTGCCAGGA CGTGCGCCCC GTCGACTACC TGCCCGAGGC GCAGCGCGCC ACCTTCCAGG GCATCGTGCG GCCGGACGGG CGCGTGGCCA CGCGCAACTT CATCGGCATC CTGGCCTCGG TCAACTGCTC GTCCAGCGTC ATCAAGAACA TCGCCGCGTG GTTCACGCCG CAGCGGCTGG CGCCGTTTCC CAACGTGGAC GGCGTGGTCG CCTTCGCGCA GACGAGCGGC TGCGGCATGT CTTCGCCGTC GGAGCATTTC GATGTGCTGC GCCGCACGCT GGCCGGCTAT GCGCGGCACC CGAACCTGGC CGGCGTGCTG ATCGTCGGCC TGGGCTGCGA GCGCAACCAG GTGGCCGATC TGATGGCCTC GCAGGGCCTG GAGACCGGCA AGCTGATGCA CACGCTGGTG ATGCAGGAGA CCGGCGGCAC GCGCGCCACC ATCGAGGCGG GCATCGATGC CATCCGGAAG ATGCTGCCGC AGGCGAACGA CGTGGCGCGC CAGCCGGTGA GCGCCAGCCA CCTGAAGATC GGCCTGGAGT GCGGTGGCTC GGACGGCTTC TCGGGCATTA CCGCCAACCC GGCGCTGGGC GCGGCGATGG ACCTGCTGGT GCGCCACGGC GGCACGGCCA TCCTGTCGGA GACGCCCGAG ATCCATGGCG TGGAATACAT GCTGACGCGC CGCGCGGTGT CGCCCGAGGT CGGCCAGAAG CTGCTCGACC GCCTGGCCTG GTGGGAGCGC TATACGCACG GACACAACGG TCAGTTCAAC GGCGTGGTGG GCCCGGGCAA CCAGCAGGGC GGCCTGGCCA ACATCTTCGA GAAGTCGCTC GGCTCGGCCA TGAAGGGCGG CACCACGCCG CTGCAGGCCG TCTACGAATA CGCCGAGCCG ATCGATCGCG CCGGCTTCGT CTTCATGGAT TCGCCGGGCT ACGACCCGGT CGCCGTGACG GGCCAGATCG CCAGCGGCGC CAACCTGATC TGCTTCACCA CCGGGCGCGG CTCGATGTTC GGCTCCAAGC CCGCGCCCAC CCTCAAGCTC GCCAGCAACA CGCCGATGTT CACGCGTCTG GAGGAGGACA TGGACATCAA CTGCGGCCGC ATCCTCGACG GCGAGCGCTC GGTGGAAGCG ATGGGGCAGG AGATCTTCGA GCACATCCTG CGCGCTGCCT CGGGCGAGCG CACCAAGAGC GAATTGCTCG GTCTGGGCGA TCATGAATTC GTGCCCTGGC ATATGGGCAT CGTGAGCTGA
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Protein sequence | MLQATQADRV TDNGPLIRLN PADNVLIARA ALSLGQPLSL GGATVRLRAQ VPAGHKIAAC RIARGEAIRK YDTVIGRAAR DIEPGEHVHT HNVELIDFER DPGFCQDVRP VDYLPEAQRA TFQGIVRPDG RVATRNFIGI LASVNCSSSV IKNIAAWFTP QRLAPFPNVD GVVAFAQTSG CGMSSPSEHF DVLRRTLAGY ARHPNLAGVL IVGLGCERNQ VADLMASQGL ETGKLMHTLV MQETGGTRAT IEAGIDAIRK MLPQANDVAR QPVSASHLKI GLECGGSDGF SGITANPALG AAMDLLVRHG GTAILSETPE IHGVEYMLTR RAVSPEVGQK LLDRLAWWER YTHGHNGQFN GVVGPGNQQG GLANIFEKSL GSAMKGGTTP LQAVYEYAEP IDRAGFVFMD SPGYDPVAVT GQIASGANLI CFTTGRGSMF GSKPAPTLKL ASNTPMFTRL EEDMDINCGR ILDGERSVEA MGQEIFEHIL RAASGERTKS ELLGLGDHEF VPWHMGIVS
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