Gene RSp1615 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSp1615 
SymboluxaA 
ID1223927 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003296 
Strand
Start bp2031720 
End bp2033279 
Gene Length1560 bp 
Protein Length519 aa 
Translation table11 
GC content69% 
IMG OID637241478 
Productputative altronate hydrolase (ALTRONIC acid hydratase) protein 
Protein accessionNP_523174 
Protein GI17549834 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2721] Altronate dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.135092 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0340906 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCAGG CAACCCAGGC CGATCGCGTG ACCGACAACG GCCCGCTGAT CCGGCTGAAC 
CCGGCCGACA ACGTGCTGAT CGCCCGCGCG GCACTGTCGC TCGGGCAGCC GCTGTCGCTG
GGCGGCGCGA CGGTGCGGCT GCGCGCCCAG GTGCCGGCCG GCCACAAGAT CGCCGCCTGC
CGCATCGCGC GCGGCGAGGC GATCCGCAAG TACGACACCG TCATCGGCCG CGCCGCGCGC
GACATCGAGC CGGGCGAGCA CGTGCACACG CACAACGTCG AGCTGATCGA TTTCGAGCGC
GACCCCGGCT TCTGCCAGGA CGTGCGCCCC GTCGACTACC TGCCCGAGGC GCAGCGCGCC
ACCTTCCAGG GCATCGTGCG GCCGGACGGG CGCGTGGCCA CGCGCAACTT CATCGGCATC
CTGGCCTCGG TCAACTGCTC GTCCAGCGTC ATCAAGAACA TCGCCGCGTG GTTCACGCCG
CAGCGGCTGG CGCCGTTTCC CAACGTGGAC GGCGTGGTCG CCTTCGCGCA GACGAGCGGC
TGCGGCATGT CTTCGCCGTC GGAGCATTTC GATGTGCTGC GCCGCACGCT GGCCGGCTAT
GCGCGGCACC CGAACCTGGC CGGCGTGCTG ATCGTCGGCC TGGGCTGCGA GCGCAACCAG
GTGGCCGATC TGATGGCCTC GCAGGGCCTG GAGACCGGCA AGCTGATGCA CACGCTGGTG
ATGCAGGAGA CCGGCGGCAC GCGCGCCACC ATCGAGGCGG GCATCGATGC CATCCGGAAG
ATGCTGCCGC AGGCGAACGA CGTGGCGCGC CAGCCGGTGA GCGCCAGCCA CCTGAAGATC
GGCCTGGAGT GCGGTGGCTC GGACGGCTTC TCGGGCATTA CCGCCAACCC GGCGCTGGGC
GCGGCGATGG ACCTGCTGGT GCGCCACGGC GGCACGGCCA TCCTGTCGGA GACGCCCGAG
ATCCATGGCG TGGAATACAT GCTGACGCGC CGCGCGGTGT CGCCCGAGGT CGGCCAGAAG
CTGCTCGACC GCCTGGCCTG GTGGGAGCGC TATACGCACG GACACAACGG TCAGTTCAAC
GGCGTGGTGG GCCCGGGCAA CCAGCAGGGC GGCCTGGCCA ACATCTTCGA GAAGTCGCTC
GGCTCGGCCA TGAAGGGCGG CACCACGCCG CTGCAGGCCG TCTACGAATA CGCCGAGCCG
ATCGATCGCG CCGGCTTCGT CTTCATGGAT TCGCCGGGCT ACGACCCGGT CGCCGTGACG
GGCCAGATCG CCAGCGGCGC CAACCTGATC TGCTTCACCA CCGGGCGCGG CTCGATGTTC
GGCTCCAAGC CCGCGCCCAC CCTCAAGCTC GCCAGCAACA CGCCGATGTT CACGCGTCTG
GAGGAGGACA TGGACATCAA CTGCGGCCGC ATCCTCGACG GCGAGCGCTC GGTGGAAGCG
ATGGGGCAGG AGATCTTCGA GCACATCCTG CGCGCTGCCT CGGGCGAGCG CACCAAGAGC
GAATTGCTCG GTCTGGGCGA TCATGAATTC GTGCCCTGGC ATATGGGCAT CGTGAGCTGA
 
Protein sequence
MLQATQADRV TDNGPLIRLN PADNVLIARA ALSLGQPLSL GGATVRLRAQ VPAGHKIAAC 
RIARGEAIRK YDTVIGRAAR DIEPGEHVHT HNVELIDFER DPGFCQDVRP VDYLPEAQRA
TFQGIVRPDG RVATRNFIGI LASVNCSSSV IKNIAAWFTP QRLAPFPNVD GVVAFAQTSG
CGMSSPSEHF DVLRRTLAGY ARHPNLAGVL IVGLGCERNQ VADLMASQGL ETGKLMHTLV
MQETGGTRAT IEAGIDAIRK MLPQANDVAR QPVSASHLKI GLECGGSDGF SGITANPALG
AAMDLLVRHG GTAILSETPE IHGVEYMLTR RAVSPEVGQK LLDRLAWWER YTHGHNGQFN
GVVGPGNQQG GLANIFEKSL GSAMKGGTTP LQAVYEYAEP IDRAGFVFMD SPGYDPVAVT
GQIASGANLI CFTTGRGSMF GSKPAPTLKL ASNTPMFTRL EEDMDINCGR ILDGERSVEA
MGQEIFEHIL RAASGERTKS ELLGLGDHEF VPWHMGIVS