| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSp1612 |
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| Symbol | ttuC |
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| ID | 1223924 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | - |
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| Start bp | 2028439 |
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| End bp | 2029524 |
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| Gene Length | 1086 bp |
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| Protein Length | 361 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637241475 |
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| Product | tartrate dehydrogenase oxidoreductase protein |
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| Protein accession | NP_523171 |
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| Protein GI | 17549831 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
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| TIGRFAM ID | [TIGR02089] tartrate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0186674 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0323069 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCCGCA AGACGTACCG GATCGCCGTG ATCCCCGGCG ATGGCATCGG CCGCGAAGTG
ATGCCCGAAG GCCTGCGCGT GCTCGATGCC GCCGCGCGCC GCTTCGGCAT CGATCTCGAA
TACCAGCACA TCGAATGGGC CAGCTGCGAC TACTACCTGC AGCACGGCCG GATGATGCCC
GACGACTGGA AGGCGCAGCT GCAGGGCGCG GACGCCATCC TCTTCGGCGC GGTCGGCTGG
CCCGCGACCG TGCCCGACCA CATCTCGCTG TGGGGTTCGC TGCTGAAGTT CCGCCGCGAG
TTCGACCAAT ACATCAACCT GCGCCCGGTG CGCCTGTTCG AGGGCGTGCC GTGCCCGCTC
GCCAACCGCA AGCCCGGCGA CATCGACTAC TACGTGGTGC GCGAGAACAC CGAGGGCGAG
TACACCTCGC TCGGCGGCAT CATGTACGAA GGCACCGACC GCGAGGTGGT GATCCAGGAA
TCCGTGTATT CGCGCAAGGG TGCTGAGCGC CTGCTGAAGT TCGCCTTCGA CCTCGCGCGC
AGCCGTGCGC GCAAGCACGT GACGCTGGCC ACCAAGAGCA ACGGCATCGC CATCAGCATG
CCCTGGTGGG ACGCGCGCGC CGACGAGGTG GCCACGCACT ACCCCGAGGT GACGCTGGAC
AAGCAGCACA TCGACATCCT CACCGCGCGC TTCGTGTTGC AGCCCGGTCG CTTCGACGTG
GTGGCCGCGA CCAACCTGTT CGGCGACATC CTCTCGGACC TGGGCCCCGC GACCACCGGC
ACCATCGGCC TCGCGCCCTC GGCCAACCTG AATCCGGACC GCACGTTCCC CTCGCTGTTC
GAGCCGGTGC ACGGCTCGGC CCCGGACATC TACGGCAAGA ACATCGCCAA CCCGATCGCC
ATGATCTGGT CGGCGGCGCT GATGCTGGAT TTCCTCACCG AGGGGCAGGG CGCGGGCCGC
GCGGCGCACG ACGCCATCGT CGCGGCCATC GAGGCCGTGC TCAAGGGCGG GCCGCGCACG
CCTGACCTGG GCGGCTCGGC CAACACCACG CAGGTGGGCG AGGCGATCGC CTCGCACCTG
GCCTGA
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| Protein sequence | MTRKTYRIAV IPGDGIGREV MPEGLRVLDA AARRFGIDLE YQHIEWASCD YYLQHGRMMP
DDWKAQLQGA DAILFGAVGW PATVPDHISL WGSLLKFRRE FDQYINLRPV RLFEGVPCPL
ANRKPGDIDY YVVRENTEGE YTSLGGIMYE GTDREVVIQE SVYSRKGAER LLKFAFDLAR
SRARKHVTLA TKSNGIAISM PWWDARADEV ATHYPEVTLD KQHIDILTAR FVLQPGRFDV
VAATNLFGDI LSDLGPATTG TIGLAPSANL NPDRTFPSLF EPVHGSAPDI YGKNIANPIA
MIWSAALMLD FLTEGQGAGR AAHDAIVAAI EAVLKGGPRT PDLGGSANTT QVGEAIASHL
A
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