Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSp1592 |
Symbol | livK |
ID | 1223904 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | - |
Start bp | 1996311 |
End bp | 1997453 |
Gene Length | 1143 bp |
Protein Length | 380 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637241455 |
Product | leucine-specific binding precursor transmembrane protein |
Protein accession | NP_523151 |
Protein GI | 17549811 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGTTTC GTTGCAAGCA ATCCATGCTG CAGGTTGTCT TCATCGTCGC GGCAGCCGTG CCTGCCGTGG GGTGGGCCCA GGCCGAGCAG ACGGTCCGCA TCGGCAACGC CGGGCCCCTG ACCGGGGGCG CCGCGCATTG GGGCAAGGAC AACGAGAACG GCGCCCGGCT CGCCGTCGAA GACCTGAACC GGAAAGGGCT CGTGATCGGC GGCAAGAAGG TCCGCTTCGA ACTGCTGTCC GAGGACGACC AGGCCGACCC GCGCCAGGCG ATGGTCGTCG CCAACAAGCT CGTGGATTCC GGGGTGAAGG CGATGCTGGG GCACTTCAAT TCGGGCGCGG CGATTCCTGC GTCCGCCATC TACGCGCGGG CGGGCATCCC CGACATTTCG GTGGCGACCA ACCCGCAGCT GACGCAGCAG GGGTTCCGGA ACACGTTCCG CATCATCGCG AGCGACGACG ATGTCGGTGC CGCGCTGTCC CGGTTCGCGG TGACGACGCT CAACGCGAAG AAGGTCGCGA TCATCGACGA CCGCACGGCC TACGGCCAGG GCGCCGCAGA GGTGTTCGAA AAAGGGGTCA AGGGGCTGGG GGCGAGCGTC GTCAGCCAGC AGTTCACGAG CGACAAGGCC ACCGACTTCA TGGCCATCCT CACCAGCATC AAGCGCACGC GGCCCGATGT CATCTTCTAC GGCGGCATGG ACGCCCAAGG CGGGCTGATC GCGCGCCAGA TGAAGCAGCT CGGGATCGGG GCCAAGCTGC TCGGCACGGA CGGCCTCTGC ACGGGCGCGG TCGCGAAGAT CAGCGCCGGC GCCGTCAACG GCACCCTCTA CTGCACCCGC GGCGGCAAGG CGCTGGACAT GATGCCGAAC GGAAGCGATT TCGCGCGGCG CTACAAGGCG CGCTTCGGCA CCGAGGTGCT GAACTACGCC CCGTATCTCT ACGATTCGCT GATGGTCATC GCGGCCGCGA TGCAGGCCGC CGATTCGGTC GAGCCGCCCC GGTATCTGCC CGCGCTGGCG AAGATCAGCC TCGACGGGAC GACCGGCCCC GTTGCCTTCG ACGAGAAGGG CAACCTGAAG ACCCCGGGCT TCACGGTCTT CACGTATCAG GATGGCAAGG CGGTTCGCGT GGCGGGGTCC TGA
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Protein sequence | MRFRCKQSML QVVFIVAAAV PAVGWAQAEQ TVRIGNAGPL TGGAAHWGKD NENGARLAVE DLNRKGLVIG GKKVRFELLS EDDQADPRQA MVVANKLVDS GVKAMLGHFN SGAAIPASAI YARAGIPDIS VATNPQLTQQ GFRNTFRIIA SDDDVGAALS RFAVTTLNAK KVAIIDDRTA YGQGAAEVFE KGVKGLGASV VSQQFTSDKA TDFMAILTSI KRTRPDVIFY GGMDAQGGLI ARQMKQLGIG AKLLGTDGLC TGAVAKISAG AVNGTLYCTR GGKALDMMPN GSDFARRYKA RFGTEVLNYA PYLYDSLMVI AAAMQAADSV EPPRYLPALA KISLDGTTGP VAFDEKGNLK TPGFTVFTYQ DGKAVRVAGS
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