Gene RSp1448 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSp1448 
SymbolpykA2 
ID1223760 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003296 
Strand
Start bp1822773 
End bp1824191 
Gene Length1419 bp 
Protein Length472 aa 
Translation table11 
GC content73% 
IMG OID637241311 
Productpyruvate kinase 
Protein accessionNP_523007 
Protein GI17549667 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0469] Pyruvate kinase 
TIGRFAM ID[TIGR01064] pyruvate kinase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.438422 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACGTT CCAGCCATGC CAAGATCGTC GCCACGCTGG GTCCGGCCAG CGACGACCAC 
GCCACGATCG AAGCGCTCGC GCGTGCGGGC GCGGATGTCT TCCGCCTGAA TTTCAGCCAC
GGCGCGCATG CCGATCATCA ACGGCGGCTC GAACGGATCC GCGCGGTGGA GGCCGCGCTC
GGCCGGCCCC TCGGTGTGCT GCTCGATCTG CAAGGCCCCA AGCTGCGCGT GGGCACCTTC
GCCGAGGGCC GGGTGCGGCT GGACGATGGC GCGCCATTCC GGCTCGACCT GGAGACCGGC
CGCCCCGGCG ACGCGACGCG CGTCGCGCTG CCGCATCCGG AAATCTTCGC GGCCATCCGG
CCCGGCGTGG CGCTGCTGCT GGACGACGGC AAGCTGCGGC TCGAAGTCGT GGCCTGCGGC
CCGGACCACG CCGAGACGCG CGTCGTCAAC GGCGGCATGC TGTCCGACCG CAAGGGCGTC
AACGTGCCGG GCGTGGTGCT GCCCCTGTCG GCGCTGACGG AGAAGGACCG CGCCGACCTG
GCCTTCGGCC TGGCGCTCGG TGTCGACTGG ATCGCGCTGT CGTTCGTGCA GCGCGCCGCC
GACATCGCCG AGATCCGGCA GCTCGTGCAC GGCCGCGCGG GCATTGTCGC CAAGCTGGAA
AAGCCGGCCG CCATCGACAG CCTGGATGCC ATCCTGGCCG AGACGGACGC GGTGATGGTC
GCGCGGGGCG ACCTGGGCGT CGAGCTGCCG GCCGAGCAGG TGCCCGCCAT CCAGAAGCGC
ATCGTGCGGG CCTGCCGCCG GCTGGGCAAG CCGGTCATCG TGGCCACGCA GATGCTGGAG
TCGATGATCG GCGCGCCGGT GCCCACCCGC GCCGAGGCCT CGGACGTGGC CACTGCCGTC
TACGATGGCG CCGATGCGGT CATGCTGTCC GCCGAGACCG CTTCCGGCCA GTTCCCGGTC
GAAGCCGTCG CCATGATGCG GCGGATCATC GCGCAGACCG AAGCCGACCC GCACTATCGC
GCCGCCATCG ACGCCTCGCA CACGCCGCCC GGCGCCAATA CGCCGGATGC GATCGGCTGC
GCCGCGCACT CGGTGGCCGG CCTGCTGGAC GTGGCGGCCA TGGTTGCCTA CACGAGCTCG
GGCGCCTCGG CGCTGCGCAT GGCGCGCGAG CGGCCCCGCG CCGCCATCCT GGGCATGACG
CCGCGCCCGG AAACCGCGCG CCGGCTGGCG CTGGTGTGGG GCGTCCATCC GGTGATCTGC
GACGGCGTGC TCGACGTCGA GGCGATGACC GACGTGGCGC GGCAGACGGC CGTGCAGCGG
CGGTTCGCGC AAGCGGGGCA GACCCTCGTC ATCGCGGCGG GCCTGCCATT CGGCACGCCG
GGATCGACCA ACCTGCTGCG CATCGCGCAG GTGGAATGA
 
Protein sequence
MQRSSHAKIV ATLGPASDDH ATIEALARAG ADVFRLNFSH GAHADHQRRL ERIRAVEAAL 
GRPLGVLLDL QGPKLRVGTF AEGRVRLDDG APFRLDLETG RPGDATRVAL PHPEIFAAIR
PGVALLLDDG KLRLEVVACG PDHAETRVVN GGMLSDRKGV NVPGVVLPLS ALTEKDRADL
AFGLALGVDW IALSFVQRAA DIAEIRQLVH GRAGIVAKLE KPAAIDSLDA ILAETDAVMV
ARGDLGVELP AEQVPAIQKR IVRACRRLGK PVIVATQMLE SMIGAPVPTR AEASDVATAV
YDGADAVMLS AETASGQFPV EAVAMMRRII AQTEADPHYR AAIDASHTPP GANTPDAIGC
AAHSVAGLLD VAAMVAYTSS GASALRMARE RPRAAILGMT PRPETARRLA LVWGVHPVIC
DGVLDVEAMT DVARQTAVQR RFAQAGQTLV IAAGLPFGTP GSTNLLRIAQ VE