Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSp1439 |
Symbol | cysE1 |
ID | 1223751 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | - |
Start bp | 1808261 |
End bp | 1809076 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637241302 |
Product | serine acetyltransferase protein |
Protein accession | NP_522998 |
Protein GI | 17549658 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1045] Serine acetyltransferase |
TIGRFAM ID | [TIGR01172] serine O-acetyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.247576 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCCAAG ATCAATTACC AGAGTGGTTC GAGCTGCGCG GAGCGCTTGA GCGAATGGCA TCCGAGGGCA CGCTTTTAAA GAGCGTGGTG GATCGGTTTC TGAATCAGCC TCGGTTTGAG GGTGCCTTGT CCATTCTGCT TGCCGATCAA TTGGCGAGTG CGCGGGCAAG CGCGGCGCAA CTGTTGCCGG TGATCGAGCA GGCCTATCGG GATCACGCCG AACTGAGCCG CCTCGCGGTG TCGGACATGC GGGCGACCAT GGAGCGCGAT CCCGCCACGG ATTGCCTGAG CACCGTATTC CTCTTCTCCA AGGGCTTTCA TGCGCTCGAG GCGTATCGGG TCGCGCACCA TTACTGGTGC GCCGGGCGTC AGGGCACGGC GCTGTCGCTG TCGCACGCAT GTTCCTGTTT GCTGGGCGTC GACATCCATC CGGCCGCGAA GATCGGCGCG GCCGTGATGT TCGACCACGC CAGCGGAATC GTCATCGGCG AAACCGCCGA AATCGGCGAC GAAGCCACGC TGCTTCATGG CGTCACGCTC GGCGGGAACG GGCGGCATCG CTGCGATCGT CATCCCAAGA TCGGCGCCGG CACGTTCATC GGCGCGCACG CATCCATCAT CGGCAACATC CGGATCGGGA AGGATTCCAT CATCGGCGCC GGCGCGGTGG TCCTGGCGGA CGTGCCGGAC AACTCGGTCG CGGTCGGTGT GCCGGCAAAG GGCAAGGCCA GGGAGCGCAA GCCCGATGCC GAGTTCCAGC CCGTGCTTGC GGCGGCGGGC GTCGCCGGCA GTCCCAGTCC TGTTTTCCTC GGTTGA
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Protein sequence | MSQDQLPEWF ELRGALERMA SEGTLLKSVV DRFLNQPRFE GALSILLADQ LASARASAAQ LLPVIEQAYR DHAELSRLAV SDMRATMERD PATDCLSTVF LFSKGFHALE AYRVAHHYWC AGRQGTALSL SHACSCLLGV DIHPAAKIGA AVMFDHASGI VIGETAEIGD EATLLHGVTL GGNGRHRCDR HPKIGAGTFI GAHASIIGNI RIGKDSIIGA GAVVLADVPD NSVAVGVPAK GKARERKPDA EFQPVLAAAG VAGSPSPVFL G
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