Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSp1407 |
Symbol | cheW |
ID | 1223719 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | - |
Start bp | 1771079 |
End bp | 1771570 |
Gene Length | 492 bp |
Protein Length | 163 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637241270 |
Product | chemotaxis protein CheW |
Protein accession | NP_522966 |
Protein GI | 17549626 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0835] Chemotaxis signal transduction protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0899451 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAGTCA AGAAACACGC GATCGGTGAA GAGACCGGCG GGGAAGAATA CCTGGCCTTC ACCCTGGGTC GCGAGGAATA CGGCATCGAC ATCCTGAAGG TCCAGGAGAT CCGTGGCTAC GAGACCGTGA CGCGCATCGC CAACGCGCCC GAGTTCATCA AGGGCGTGAT CAACCTGCGC GGGATCATCG TGCCGATCGT CGATCTGCGC ATCAAGTTCG AGCTGGAGCG CGTCGAGTAC AACCAGTACA CCGTCGTCAT CATCCTGAAC CTGACCGATC GCGTGGTCGG CATCGTGGTG GACGGCGTGT CGGACGTGCT GACGCTGCAG AGCCAGCAGA TCAAGCCGGC GCCGGAGTTC TCGGGCGCGC TGGACACGGA ATACATCCGT GGCCTGGGTT CGATCGATGA GCGCATGCTG ATCCTGGTGG ACATCGAGAA GCTGCTGATG TCGGCCGACA TGGCGCTGTG CGACGAAGCC GAAGCGGCCT GA
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Protein sequence | MEVKKHAIGE ETGGEEYLAF TLGREEYGID ILKVQEIRGY ETVTRIANAP EFIKGVINLR GIIVPIVDLR IKFELERVEY NQYTVVIILN LTDRVVGIVV DGVSDVLTLQ SQQIKPAPEF SGALDTEYIR GLGSIDERML ILVDIEKLLM SADMALCDEA EAA
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