Gene RSp1407 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSp1407 
SymbolcheW 
ID1223719 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003296 
Strand
Start bp1771079 
End bp1771570 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content62% 
IMG OID637241270 
Productchemotaxis protein CheW 
Protein accessionNP_522966 
Protein GI17549626 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0835] Chemotaxis signal transduction protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0899451 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGTCA AGAAACACGC GATCGGTGAA GAGACCGGCG GGGAAGAATA CCTGGCCTTC 
ACCCTGGGTC GCGAGGAATA CGGCATCGAC ATCCTGAAGG TCCAGGAGAT CCGTGGCTAC
GAGACCGTGA CGCGCATCGC CAACGCGCCC GAGTTCATCA AGGGCGTGAT CAACCTGCGC
GGGATCATCG TGCCGATCGT CGATCTGCGC ATCAAGTTCG AGCTGGAGCG CGTCGAGTAC
AACCAGTACA CCGTCGTCAT CATCCTGAAC CTGACCGATC GCGTGGTCGG CATCGTGGTG
GACGGCGTGT CGGACGTGCT GACGCTGCAG AGCCAGCAGA TCAAGCCGGC GCCGGAGTTC
TCGGGCGCGC TGGACACGGA ATACATCCGT GGCCTGGGTT CGATCGATGA GCGCATGCTG
ATCCTGGTGG ACATCGAGAA GCTGCTGATG TCGGCCGACA TGGCGCTGTG CGACGAAGCC
GAAGCGGCCT GA
 
Protein sequence
MEVKKHAIGE ETGGEEYLAF TLGREEYGID ILKVQEIRGY ETVTRIANAP EFIKGVINLR 
GIIVPIVDLR IKFELERVEY NQYTVVIILN LTDRVVGIVV DGVSDVLTLQ SQQIKPAPEF
SGALDTEYIR GLGSIDERML ILVDIEKLLM SADMALCDEA EAA