Gene RSp1392 details

Gene Information

• Locus tag: RSp1392
• Symbol: flhF
• ID: 1223704
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ralstonia solanacearum GMI1000
• Kingdom: Bacteria
• Replicon accession: NC_003296
• Strand: -
• Start bp: 1752159
• End bp: 1754006
• Gene Length: 1848 bp
• Protein Length: 615 aa
• Translation table: 11
• GC content: 71%
• IMG OID: 637241255
• Product: flagellar biosynthesis regulator FlhF
• Protein accession: NP_522951
• Protein GI: 17549611
• COG category: [N] Cell motility
• COG ID: [COG1419] Flagellar GTP-binding protein
• TIGRFAM ID: [TIGR03499] flagellar biosynthetic protein FlhF

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.70556
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 16
• Fosmid unclonability p-value: 0.873856
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAAGATGC ATCGATTCAC CGGACTGACC TCGCGCGATG TCCTGCGCAA GGTGCGCGAC 
CAGCTGGGCG ACGGCGCGCT GATTCTCTCG AACCGCGCCA TCCCCGGCGG CATCGAGGTC 
ATCGCAGCCT CCGACTCGCA TCTGGATGCG CTGATCGATA CGCAGTCCAC GGCACCCAGG 
GCCGCGCAGC GCCGGCCGGT GATGCCCGCG CCGATTCCCG AGCCGGTCCC GGCCGCCGAC 
AGCGCCGCAC CCGAAGCGGC CGCGGCCGCA ACGGCGGCAC AGGCCTCGGC CGATGCGCCG 
ACGCTCAACG CGCTGGCCCG CCTGCGCAAC CGCTTTGCCG GCGCGCGCCG CGCCGCCGCG 
CACGAAGAGG CGGACGCCGC CAAGCCCGCA GCCGGCCGCA AGGTGCAGAC CCGCGTGGAC 
GACGACGTCT CGCTCGACGC CGCGGCCGAG GAGCCGCTGG CCGCATCCAC CCGCGTGCTG 
GCCGGCCTGC TGATGGACCA CGCCAACGAC GACGCGGCCC AGACGCTGGC CAGCACCGCC 
CAGTTCATCG CACGCCGCAC CCTGGCTGCC GACGAGAGCG AGCCGCCCGT GCAGCGCGCG 
GCCACGGCTC GCGAGCCGCG CTCGCTGCGC AGCTTCGCCG AGCGCGTCGA GGCCCAGGCC 
CGCGCCGCGC GCGCCGAACA GGCCGCGGCC GAGCAGGCCC GGCAGCAGCC GGTCGCGGCG 
GCGCAGCCCG AGACCCGCAA GCCCTCCGAC GTCTTCGTGC GCATGGAGGA GCCGGTGGCC 
CGCGCCGACG CGCCGTACGA CGATCTGAGC CTGCCGCGCC CGGAAATCCA GGCCAGCTTC 
AAGGCTGACT TCAAGGCTGA CTTCAAGGCC GAGACCGACG CCATGACCCG CCGCATGGTC 
GGCGAGATCG AAGTCCTGAA GAGCACGCTC ACCGACGCGA TGTCGAGCCT GGCCTCGCTG 
GGCGTCAAGC TGGGCGACCC GGTGCGCACG CGCCTGTTCC AGACCATGCT GAACGCGGGC 
TTCTCGGCGC AGCTCACGCG CTATGTGCTG GACAACATGC CGCAGCACGG CACGTATGAC 
AGTGCGCTGG ACTTCGTGCA GCGCGCCCTG GAGAAGAACC TGACGGTGGT GCCCAACGAG 
AACAGCCTGC TCGACCAGGG CGGCGTGTTC GCCCTGATGG GTCCGACCGG CGTGGGCAAG 
ACCACCACCA CCGCCAAGCT GGCCGCGCGC TTCGTGCTGC GCCACGGCGC CTCGCGCGTC 
GCGCTGCTCT CGACCGACAG CTACCGGATC GGCGGCCACG AGCAGCTGCG CATCTACGGC 
AAGATCCTGG GCGTCACGGT GCACGCCGTG AAGGACGCGC AAGACCTGAG CCTGGCGCTG 
GGCGACCTGC GCGAGAAGCA CGTGGTGCTG ATCGACACCA TCGGCATGAG CCAGCGCGAT 
CGCGCCGTCT CCGAGCAGAT GGCGATGCTG CATGCCGTGG GCCCGTCGAT CAAGCGCCTG 
CTGCTGCTCA ACGCCACCAG CAACGGCAAG ACGCTGGACG AAGTGGTGAG CGCCTACCGC 
GACGCCAACC TCGCCGGCTG CATCCTCACC AAGATCGACG AGGCCGCTTC CGTCGGCCAC 
GCGATGGACG CGATGATCCG CCACCGCCTG CCGCTGCACT ACGTGTCGTA CGGCCAGCGT 
GTGCCGGAAG ACATCGCCGT GCCCAACAAG AAGATGCTGA TCCACCGCAC GTTCCGGACC 
AGCGCCGAGC AGTCGTCGTT CGCGCTGGAC TCGGATGAAT CGCTGCTGGT GGCCCAAGGC 
CCCGCGCGGA GCCGCGAACC CGGTCTGGCT GCGTTCGACT TTGCCTGA 

 

Protein sequence

MKMHRFTGLT SRDVLRKVRD QLGDGALILS NRAIPGGIEV IAASDSHLDA LIDTQSTAPR 
AAQRRPVMPA PIPEPVPAAD SAAPEAAAAA TAAQASADAP TLNALARLRN RFAGARRAAA 
HEEADAAKPA AGRKVQTRVD DDVSLDAAAE EPLAASTRVL AGLLMDHAND DAAQTLASTA 
QFIARRTLAA DESEPPVQRA ATAREPRSLR SFAERVEAQA RAARAEQAAA EQARQQPVAA 
AQPETRKPSD VFVRMEEPVA RADAPYDDLS LPRPEIQASF KADFKADFKA ETDAMTRRMV 
GEIEVLKSTL TDAMSSLASL GVKLGDPVRT RLFQTMLNAG FSAQLTRYVL DNMPQHGTYD 
SALDFVQRAL EKNLTVVPNE NSLLDQGGVF ALMGPTGVGK TTTTAKLAAR FVLRHGASRV 
ALLSTDSYRI GGHEQLRIYG KILGVTVHAV KDAQDLSLAL GDLREKHVVL IDTIGMSQRD 
RAVSEQMAML HAVGPSIKRL LLLNATSNGK TLDEVVSAYR DANLAGCILT KIDEAASVGH 
AMDAMIRHRL PLHYVSYGQR VPEDIAVPNK KMLIHRTFRT SAEQSSFALD SDESLLVAQG 
PARSREPGLA AFDFA