Gene RSp1371 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSp1371 
SymbolnosF 
ID1223683 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003296 
Strand
Start bp1726418 
End bp1727362 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content68% 
IMG OID637241234 
Productcopper ATP-binding ABC transporter protein 
Protein accessionNP_522930 
Protein GI17549590 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACAAGCA GCCTTGAGAA CAACGCCGCC ATCGTGCTGC GCGACGTCGG CAAAGACTAC 
GGCACCGTCC GCGCGGTCGA TGGCGTGAAC CTGGAGGTCG GGTACGGCGA GCTGTTCGGC
CTCATCGGCC ATAACGGCGC CGGCAAGAGC ACGCTCTTCA GGATGATGCT GGGGCTGATT
CCGGTAAGCG AGGGCGAGAT TCACGTGGCC GGCGCCTCGC TGCGCACCGC GGCTTTCCGC
GCCGCGCGCC GCCGGATCGG CTATCTGCCG GAGAACCTCG CCCTGTACGA CAACCTGAGC
GGACTGGAAA CCCTGCGCTT CTTTGCCAGG CTCAAGGGCG CGGCGACGGG CGATTGCGAG
GCGCTGCTCG CGCGCGTGGG CTTGCAGGGC GCGACCGCCA AGCCGGTGCG CGCCTATTCC
AAGGGCATGC GGCAGCGGCT CGGTTTTGCC CAGGCCCTGC TTGGCGCGCC GCGCGTGCTC
TTTCTCGATG AGCCCACCAA CGGTCTGGAC CCGGCGGCCA TCCACGACTT CTACGCCATG
CTGCAGCGGC TGCGCGAACA GGGCGTCACG ATCCTGATCA CCTCGCATAT CCTGGCCGAA
CTCCAGCAGC GCATCGATCG CCTGGCCGTC ATGGCCGATG GCCGCATCCT CGCGCTCGGC
AGCGTTGCCG GCCTGCGCGA GCAGGCGGAT CTTCCGCTGG CCCTGGTGCT GCGCGTTGCA
TCCGGTTCGC GCGCCGCGTT CCGGCAGCAT CTGGCACCGT TGCGCGCGCA CGGCGTCGAG
ATCGAAGACG GCCCCGCTGA GCAGGATCTC ACCTTGCGAT GCCGGCATGC CGTCAAGATG
CAGGTCTTGG CGACATTGCA ATCGCTGGGC GGCCGCCTGC TCGATCTGCA GATCCGGGAA
GCGTCGCTGG AAGACCTGTT CTTCGGCCTC GGGAGCGCGG CATGA
 
Protein sequence
MTSSLENNAA IVLRDVGKDY GTVRAVDGVN LEVGYGELFG LIGHNGAGKS TLFRMMLGLI 
PVSEGEIHVA GASLRTAAFR AARRRIGYLP ENLALYDNLS GLETLRFFAR LKGAATGDCE
ALLARVGLQG ATAKPVRAYS KGMRQRLGFA QALLGAPRVL FLDEPTNGLD PAAIHDFYAM
LQRLREQGVT ILITSHILAE LQQRIDRLAV MADGRILALG SVAGLREQAD LPLALVLRVA
SGSRAAFRQH LAPLRAHGVE IEDGPAEQDL TLRCRHAVKM QVLATLQSLG GRLLDLQIRE
ASLEDLFFGL GSAA