| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSp1370 |
|---|
| Symbol | nosD |
|---|
| ID | 1223682 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003296 |
|---|
| Strand | + |
|---|
| Start bp | 1725163 |
|---|
| End bp | 1726434 |
|---|
| Gene Length | 1272 bp |
|---|
| Protein Length | 423 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637241233 |
|---|
| Product | copper-binding periplasmic NOSD signal peptide protein |
|---|
| Protein accession | NP_522929 |
|---|
| Protein GI | 17549589 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3420] Nitrous oxidase accessory protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGGTGGC TGCCGATGCT GCTCTTCCTG GCCGGATGGC TGGCGCTCGC CCAGGCCGCC
ACGGTGCGCG TCAGCGCGGG GCAGCCGCTG CAGGCCGCGA TCGATGCGGC GCATCCCGGC
GATATGCTGG AGATCGAGCA CGCGACGTAC ACCGGCAACT TCGTCGTCAA CCGGGCCCTG
ACGCTGCGCG GGCTGGACCG CCCCACGCTC AGCGGCGGCC AGCGCGGCGA CACCGTGCGC
GTGAGTGCGC CGGACGTCGT GATCGAAGGG CTGATCGTGC GCGATTCCGG CGACAGCCTG
AAGGACCAGA ACGCCGGCAT CAACATCCTG CCGGGCGCGC ACCGGGCCGT GGTGCGCCAT
TGCGATCTGA CCTACAACCT GTTCGGGCTG TGGATCGAGA AGGCGGATGA CGTGCGCATC
GAGGGCAATA CCATCACCGG CAAGCGCGAC TACAACTCCG CGCAGCGCGG CAACGGGGTG
GAGCTGTACA ACACGCAGCG CGCCCGCATC CTCGCCAACA ACATCAGCTT CGTGCGCGAC
GCGCTGTATG TCGACGTGTC GCACCACGCG GTCTTCAAAG GCAACCGCCT TCACCACAGC
CGCTACGGCA CGCACTACAT GAACTCCTAC TACAACCTGT GGGAGGACAA CGACAGCTAC
GACAATCGCG GCGGCCTGGC GCTGATGGAG GTGCGCGATC AGATCGTGCG CAACAACCGC
ACCTGGGGCA ATGCCGACCA CGGCATCATG CTGCGCACCT TGCAGGACTC GCGCGTGGAA
GACAACGTCG TCGCCGGCAA TGACCGCGGG TTCTTCATCT ACGACGTCGA ATACACGCAA
CTGCGCGGCA ATCTGGTGAT CGGCAACCGG GTGGGCGTCC ATCTGTCCGC CGGGTCCACG
CGCAATGTGG TGCAGGGCAA CGACTTCATC GGCAACCGCG AGCCGGTGCG TTACGTCGGC
GCACGCGATG AAGCCTGGGG CGGCCGCTCG CCGGCGGAGC GCTCGCAAGG CAACTTCTGG
AGCAACTACC TGGGCTGGGA TCGCGATGGC GATGGCATCG GCGACCTGCC GTACGAAGCC
AACAACATGG TGGATCGGCT GATCTGGCGC CATCCCGGCG TGCAGCTGCT GCTGGCCAGT
CCGGCGGTGC AGGTGCTGCG GCTTGTGAGC CGCCAGTTCC CCATCCTGCG CGTGCCGAGC
GTCGTTGACG CGTACCCGCG CATGCAGCCC ATCCACCCGA ACTGGAGCAC GTGGCGTGAC
AAGCAGCCTT GA
|
|---|
| Protein sequence | MRWLPMLLFL AGWLALAQAA TVRVSAGQPL QAAIDAAHPG DMLEIEHATY TGNFVVNRAL
TLRGLDRPTL SGGQRGDTVR VSAPDVVIEG LIVRDSGDSL KDQNAGINIL PGAHRAVVRH
CDLTYNLFGL WIEKADDVRI EGNTITGKRD YNSAQRGNGV ELYNTQRARI LANNISFVRD
ALYVDVSHHA VFKGNRLHHS RYGTHYMNSY YNLWEDNDSY DNRGGLALME VRDQIVRNNR
TWGNADHGIM LRTLQDSRVE DNVVAGNDRG FFIYDVEYTQ LRGNLVIGNR VGVHLSAGST
RNVVQGNDFI GNREPVRYVG ARDEAWGGRS PAERSQGNFW SNYLGWDRDG DGIGDLPYEA
NNMVDRLIWR HPGVQLLLAS PAVQVLRLVS RQFPILRVPS VVDAYPRMQP IHPNWSTWRD
KQP
|
|---|
| |