| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSp1366 |
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| Symbol | abpE |
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| ID | 1223678 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | - |
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| Start bp | 1718887 |
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| End bp | 1719909 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637241229 |
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| Product | thiamine biosynthesis APBE transmembrane protein |
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| Protein accession | NP_522925 |
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| Protein GI | 17549585 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGCTT CGGCTCCTTC CAACCTTGCC CGCCGGCGTT GCCTGACCGG CGTGCCCCTG
CTGGCGGTCG GCCTGTTCGT GCGGCCGGCG CTGGCCGATC CCGCCGTCCA GCACGCGTCG
CGCCGGCTGC TCGGCACGCA AGTCGACATC GTGGCGCAAG GCGCGATGCC CGGTGCCGCC
GCGCCGGCCA TCGATGCCGC CTTCGCCGAG ATGGCCCGGC TTGAACGGCT GATGAGCCGC
TACCGCCCGG ACAGCCAGGT CAGCGCACTG GCGCGCGCGG CCGGGCGGAA CCCGGTGCCG
GTGGCGCCGG AATTGATGGC GATACTCAAG CTGGCCGCGC GGCTCTCGGC GCGAAGCGGG
GGGGCCTTCG ATATCACCGT CGGCGCGTTC TCCGGCTGGA ATTTCGATCC GGCCCAGGCC
CGGATCCCGA GCCGCGCCGA GCTCGTGCAC GAGCAGCGGC TGGTGAACTA TCGCGATGTC
GTCCTCGACC AGGCACGAGG CCGTGTCTAC CTGCGCCGCC CCGGCATGAA GCTCGACCTG
GGCGGCGTCG CCAAGCTGCC GATCCTGCAG GCAGGCCTGC GCGTGCTGCG GCGACACGGT
GTCCGTGACG CGATGATCAA CGGGGGCGGC GACGTGCTGG TCAGCGGGCA GCTCCAGGGC
CACGACTGGC GGGTCGGGCT GCGCAACCCG CTCGCGCCCG ACCGATTGCT CGGCGTGGTG
GCGCTCAGCG ACGGCATCGT GGCCTCATCA GGCGACTACG AGCGCGGCTT CGTCCGCAAC
GGCCAGCGCT ACCACCACAT TCTCGACCCG AAGACCGGCC TGCCGACCCA TGGCCCGCAT
GGCGTCACCC TGGTTGCTCG CAGCGTTGAC GATGTGAACG GGCTCGGTGC AGCCATCATG
GTGGCCGGCG CGGAGGCAGG GCGGCGCCTG CTGGTGCCGC CGGCGGGCGT GGATGCGCTC
ATCATGGGCC CCGGGCCCCG TCCATGGATG TCGCCCGGCA TGGCCTTGCG CTTGCAGACA
TGA
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| Protein sequence | MRASAPSNLA RRRCLTGVPL LAVGLFVRPA LADPAVQHAS RRLLGTQVDI VAQGAMPGAA
APAIDAAFAE MARLERLMSR YRPDSQVSAL ARAAGRNPVP VAPELMAILK LAARLSARSG
GAFDITVGAF SGWNFDPAQA RIPSRAELVH EQRLVNYRDV VLDQARGRVY LRRPGMKLDL
GGVAKLPILQ AGLRVLRRHG VRDAMINGGG DVLVSGQLQG HDWRVGLRNP LAPDRLLGVV
ALSDGIVASS GDYERGFVRN GQRYHHILDP KTGLPTHGPH GVTLVARSVD DVNGLGAAIM
VAGAEAGRRL LVPPAGVDAL IMGPGPRPWM SPGMALRLQT
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