| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSp1331 |
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| Symbol | tISRso17 |
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| ID | 1223643 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | - |
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| Start bp | 1680720 |
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| End bp | 1682081 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637241194 |
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| Product | ISRSO17-transposase protein |
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| Protein accession | NP_522890 |
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| Protein GI | 17549550 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG5659] FOG: Transposase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACTTCC TAATTCAAGG TGGGGAGTGC ATGAGCGCAA GCGACCGATT TGCGGAGTAC
ATGAACTACT TGGCTGAGGG ATTGGGGCAT GCAGATCGCC GGGCCGGCTT GGAGAGCTAT
TGCACTGGCC TGATGCTGCC GCTGTCGCGC AAGAGCGTCG AACCGATGGC GGCACGGGTT
GACCCGTTGC ATGCCAGTGC TCGGCATCAG TCACTGCACC ACTTCGTCTC CAAATCCGAT
TGGTCGGATA CGGCGTTGTT AAGCCGTGTC CGGGACTGGG TTCAGCCCTT GCTGGAAGCG
CCAAGCGGTC GCTATTGGAT CATTGACGAC ACGGGTTTCC CTAAGAAAGG CAAACATTCG
GTTGGCGTGG CACGCCAATA TTGCGGCCAG CTTGGCAAAC AGGACAACTG CCAGGTGGCA
GTCAGCCTGT CGCTGGCCAC AGAGCAAGGC AGCCTTCCGA TTGCCTATCA GCTTTATCTC
CCCAAGGAAT GGGCCGACGA TGCGACTCGC CGCCAGAAGG CCGGCGTGCC TGACGATATC
GTGTTCGCCA CCAAGCCGGA GATTGCCCTG GCGCAAGTGC GCGAGGCGAT CGCAGCCGGG
GTGCCAGCCG GAGTCGTGCT GGCCGACGCT GCATATGGCG ATGAAACCGG GTTTCGCGAA
AATCTGACCG AGTTGGGTCT GCTTTACGCC GTCGGGATTC GCTCCACGAC GACGGTGTGG
CCGCCGGGCG TTTCGCCACT GCCGGCCAAA CCGGCGAGCG GTCCGGGTAG GCCACCGAAG
TTGTTGCGTC GCGCACCGGG CCATGAGCCG GTTTCAGTGA AGACCCTGGC GATGGCATTA
CCCTCGAGCG CTTACCAAGT GGTGACTTGG CGGGAAGGCA TCAATACAGC CCTTTCATCG
CGATTTGCGG CCGTGCGGGT TCGCCCGGCG CATCGGGACT ATTGGCGCAG CACCTTGCGC
GACGAAGAAT GGTTGCTGGT TGAGTGGCCG GGGGGCGAAG CGGAGCCAAC CAAATACTTC
TTGTCCACAG CACCAGCCGA TGCGCTGATA GAACAACTGG TGTTCGTGAC CAAAATGCGT
TGGCGTATTG AGCGCGATTA CCAGGACTTG AAACAAGAGC TCGGCCTTGG TCACTACGAA
GGCCGGGGCT GGCGCGGATT CCACCATCAT GCGACGCTGA GTATCGCAGC CTATGGCTTC
CTGATGGCCG AACGACTCGC TGCAGACAAG CCCGTGGGGA ATAAAAAAAA CTTCCTCGAA
TGCCAGATAC CTGCGCTTCC CGCGGATTAC ATCCCCCGTG GCAGCCCTGC GTGCGCAGCG
ACACGTGACG AATTCAATCC CCACACTCCG TCATCAACTT AG
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| Protein sequence | MYFLIQGGEC MSASDRFAEY MNYLAEGLGH ADRRAGLESY CTGLMLPLSR KSVEPMAARV
DPLHASARHQ SLHHFVSKSD WSDTALLSRV RDWVQPLLEA PSGRYWIIDD TGFPKKGKHS
VGVARQYCGQ LGKQDNCQVA VSLSLATEQG SLPIAYQLYL PKEWADDATR RQKAGVPDDI
VFATKPEIAL AQVREAIAAG VPAGVVLADA AYGDETGFRE NLTELGLLYA VGIRSTTTVW
PPGVSPLPAK PASGPGRPPK LLRRAPGHEP VSVKTLAMAL PSSAYQVVTW REGINTALSS
RFAAVRVRPA HRDYWRSTLR DEEWLLVEWP GGEAEPTKYF LSTAPADALI EQLVFVTKMR
WRIERDYQDL KQELGLGHYE GRGWRGFHHH ATLSIAAYGF LMAERLAADK PVGNKKNFLE
CQIPALPADY IPRGSPACAA TRDEFNPHTP SST
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