Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSp1301 |
Symbol | tISRso17 |
ID | 1223613 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | - |
Start bp | 1650530 |
End bp | 1651891 |
Gene Length | 1362 bp |
Protein Length | 453 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637241164 |
Product | ISRSO17-transposase protein |
Protein accession | NP_522860 |
Protein GI | 17549520 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG5659] FOG: Transposase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTACTTCC TAATTCAAGG TGGGGAGTGC ATGAGCGCAA GCGACCGATT TGCGGAGTAC ATGAACTACT TGGCTGAGGG ATTGGGGCAT GCAGATCGCC GGGCCGGCTT GGAGAGCTAT TGCACTGGCC TGATGCTGCC GCTGTCGCGC AAGAGCGTCG AACCGATGGC GGCACGGGTT GACCCGTTGC ATGCCAGTGC TCGGCATCAG TCACTGCACC ACTTCGTCTC CAAATCCGAT TGGTCGGATA CGGCGTTGTT AAGCCGTGTC CGGGACTGGG TTCAGCCCTT GCTGGAAGCG CCAAGCGGTC GCTATTGGAT CATTGACGAC ACGGGTTTCC CTAAGAAAGG CAAACATTCG GTTGGCGTGG CACGCCAATA TTGCGGCCAG CTTGGCAAAC AGGACAACTG CCAGGTGGCA GTCAGCCTGT CGCTGGCCAC AGAGCAAGGC AGCCTTCCGA TTGCCTATCA GCTTTATCTC CCCAAGGAAT GGGCCGACGA TGCGACTCGC CGCCAGAAGG CCGGCGTGCC TGACGATATC GTGTTCGCCA CCAAGCCGGA GATTGCCCTG GCGCAAGTGC GCGAGGCGAT CGCAGCCGGG GTGCCAGCCG GAGTCGTGCT GGCCGACGCT GCATATGGCG ATGAAACCGG GTTTCGCGAA AATCTGACCG AGTTGGGTCT GCTTTACGCC GTCGGGATTC GCTCCACGAC GACGGTGTGG CCGCCGGGCG TTTCGCCACT GCCGGCCAAA CCGGCGAGCG GTCCGGGTAG GCCACCGAAG TTGTTGCGTC GCGCACCGGG CCATGAGCCG GTTTCAGTGA AGACCCTGGC GATGGCATTA CCCTCGAGCG CTTACCAAGT GGTGACTTGG CGGGAAGGCA TCAATACAGC CCTTTCATCG CGATTTGCGG CCGTGCGGGT TCGCCCGGCG CATCGGGACT ATTGGCGCAG CACCTTGCGC GACGAAGAAT GGTTGCTGGT TGAGTGGCCG GGGGGCGAAG CGGAGCCAAC CAAATACTTC TTGTCCACAG CACCAGCCGA TGCGCTGATA GAACAACTGG TGTTCGTGAC CAAAATGCGT TGGCGTATTG AGCGCGATTA CCAGGACTTG AAACAAGAGC TCGGCCTTGG TCACTACGAA GGCCGGGGCT GGCGCGGATT CCACCATCAT GCGACGCTGA GTATCGCAGC CTATGGCTTC CTGATGGCCG AACGACTCGC TGCAGACAAG CCCGTGGGGA ATAAAAAAAA CTTCCTCGAA TGCCAGATAC CTGCGCTTCC CGCGGATTAC ATCCCCCGTG GCAGCCCTGC GTGCGCAGCG ACACGTGACG AATTCAATCC CCACACTCCG TCATCAACTT AG
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Protein sequence | MYFLIQGGEC MSASDRFAEY MNYLAEGLGH ADRRAGLESY CTGLMLPLSR KSVEPMAARV DPLHASARHQ SLHHFVSKSD WSDTALLSRV RDWVQPLLEA PSGRYWIIDD TGFPKKGKHS VGVARQYCGQ LGKQDNCQVA VSLSLATEQG SLPIAYQLYL PKEWADDATR RQKAGVPDDI VFATKPEIAL AQVREAIAAG VPAGVVLADA AYGDETGFRE NLTELGLLYA VGIRSTTTVW PPGVSPLPAK PASGPGRPPK LLRRAPGHEP VSVKTLAMAL PSSAYQVVTW REGINTALSS RFAAVRVRPA HRDYWRSTLR DEEWLLVEWP GGEAEPTKYF LSTAPADALI EQLVFVTKMR WRIERDYQDL KQELGLGHYE GRGWRGFHHH ATLSIAAYGF LMAERLAADK PVGNKKNFLE CQIPALPADY IPRGSPACAA TRDEFNPHTP SST
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